[Bioc-devel] Author names with special characters

Nuno Agostinho nunodanielagostinho at gmail.com
Sun Oct 23 23:29:31 CEST 2016


Hey Steffen,

Thank you for the instructions! I did not notice that field.

Best regards,
Nuno

> On 23 Oct 2016, at 18:54, Steffen Neumann <sneumann at ipb-halle.de> wrote:
> 
> Hi,
> 
> you should enable utf8 encoding, see below.
> 
> Yours, 
> Steffen
> 
> 
> https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/HDF5Array/DESCRIPTION
> 
> 
> Package: HDF5Array
> Title: An array-like container for convenient access and manipulation of HDF5
> 	datasets
> Description: This package implements the HDF5Array class for convenient access
> 	and manipulation of HDF5 datasets. In order to reduce memory usage and
> 	optimize performance, operations on an HDF5Array object are either
> 	delayed or executed using a block processing mechanism.
> 	The delaying and block processing mechanisms are independent of the
> 	on-disk backend and implemented via the DelayedArray class. They even
> 	work on in-memory array-like objects like DataFrame objects (typically
> 	with Rle columns), Matrix objects, or ordinary arrays or data frames,
> 	where they can improve performance.
> Version: 1.3.0
> Encoding: UTF-8
> Author: Hervé Pagès
> Maintainer: Hervé Pagès <hpages at fredhutch.org>
> biocViews: Infrastructure, DataRepresentation, Sequencing, Annotation, Coverage, GenomeAnnotation
> Depends: R (>= 3.2), methods, BiocGenerics (>= 0.15.3), S4Vectors (>= 0.9.43),
> 	IRanges (>= 2.7.6)
> Imports: stats, rhdf5
> Suggests: Matrix, h5vcData, SummarizedExperiment, GenomicRanges, genefilter,
> 	BiocStyle, knitr, rmarkdown
> VignetteBuilder: knitr
> License: Artistic-2.0
> Collate:
> 	utils.R
> 	block_processing.R
> 	setHDF5DumpFile.R
> 	show-utils.R
> 	DelayedArray-class.R
> 	DelayedArray-utils.R
> 	DelayedMatrix-utils.R
> 	cbind-methods.R
> 	DelayedArray-stats.R
> 	HDF5Array-class.R
> 	zzz.R
> 
> 
> 
> 
> On So, 2016-10-23 at 12:14 +0100, Nuno Agostinho wrote:
>> Dear all,
>> 
>> I am sorry if this question is basic but I did not find the answer
>> online nor in Bioconductor forums.
>> 
>> One of the authors of my package (https://bioconductor.org/packages/3
>> .5/bioc/html/psichomics.html
>> <https://bioconductor.org/packages/3.5/bioc/html/psichomics.html>)
>> has special characters: its name should be André Falcão, yet the
>> Bioconductor landing page shows its name as Andr<c3><a9>
>> Falc<c3><a3>o. 
>> 
>> What I have tried so far with no success:
>> - Type the respective Unicode code of the characters (Andr\u00E9
>> Falc\u00E3o)
>> - Type the characters directly (André Falcão) as Hervé Pagès did in
>> HDF5Array <https://bioconductor.org/packages/3.5/bioc/html/HDF5Array.
>> html>
>> 
>> Both result in Andr<c3><a9> Falc<c3><a3>o. Do you know how I should
>> type the name so it is correctly displayed?
>> 
>> Thanks for your time.
>> 
>> Best regards,
>> Nuno Agostinho
>> 	[[alternative HTML version deleted]]
>> 
>> _______________________________________________
>> Bioc-devel at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
> -- 
> IPB Halle                    AG Massenspektrometrie & Bioinformatik
> Dr. Steffen Neumann          http://www.IPB-Halle.DE
> Weinberg 3                   Tel. +49 (0) 345 5582 - 1470
> 06120 Halle                       +49 (0) 345 5582 - 0           
> sneumann(at)IPB-Halle.DE     Fax. +49 (0) 345 5582 - 1409
> 
> 



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