[Bioc-devel] Coverage test badge not updating

[Leonardo Collado Torres]

Hi,

I know that there are several old threads about the coverage badges
including this thread. Basically, while Bioc 3.4 was in devel, the
coverage badges didn't work for Bioc release (3.3). However, now that
3.4 has been released, the badges for Bioc-release (3.4) are still not
working and they only work for Bioc-devel (3.5).

In one of the threads, Dan mentioned that something at codecov had
changed and that he was going to ask for advice on how to proceed. I'm
just curious if there are any updates on this issue. If it's only
possible to have the coverage badges work for one branch, then it
might be best to leave them in Bioc-devel (given Jim's arguments
earlier) and remove them from Bioc-release.

Best,
Leo

On Mon, Nov 23, 2015 at 4:25 PM, Leonardo Collado Torres
<lcollado at jhu.edu> wrote:
>
> Thank you for fixing this Jim! I noticed it working now on devel.
> However, I believe that is still not working for the release branch.
>
> Cheers,
> Leo
>
> On Fri, Nov 20, 2015 at 3:37 PM, Jim Hester <james.f.hester at gmail.com> wrote:
> > The coverage tests were inadvertently not running, but they are now
> > re-enabled.
> >
> > Please let us know if you notice any other problems
> >
> > Jim
> >
> > On Tue, Nov 17, 2015 at 12:16 PM, Leonardo Collado Torres <lcollado at jhu.edu>
> > wrote:
> >>
> >> Hi,
> >>
> >> In my packages I enabled testing (via testthat) a few weeks ago. I did
> >> so as can be seen in
> >>
> >> https://github.com/leekgroup/derfinderHelper/commit/26d9d5543d9082f85bbb2d0ae9f02c5c309b9a48
> >> for the changes to tests/test-all.R You can see that the tests are
> >> actually being run at
> >>
> >> http://bioconductor.org/checkResults/devel/bioc-LATEST/derfinderHelper/zin2-checksrc.html
> >> Specifically at the lines:
> >>
> >> * checking tests ...
> >>   Running ‘test-all.R’ [3s/13s]
> >>  [3s/14s] OK
> >>
> >> I'm wondering if the coverage tests are only run at a less frequent
> >> pace (say once per month) or if my tests/test-all.R file is still
> >> posing problems to covr.
> >>
> >> Thanks,
> >> Leo
> >>
> >> _______________________________________________
> >> Bioc-devel at r-project.org mailing list
> >> https://stat.ethz.ch/mailman/listinfo/bioc-devel
> >
> >