[Bioc-devel] Build fails on windows: R_igraph_make_weak_ref not available

[Dan Tenenbaum]

I think it's a problem with igraph (a CRAN package) under the new toolchain. I was just in the process of filing a github issue with that package maintainer. Watch for it at https://github.com/igraph/igraph/issues/ .

Dan


----- Original Message -----
> From: "Luca De Sano" <l.desano at campus.unimib.it>
> To: "bioc-devel" <bioc-devel at r-project.org>
> Sent: Thursday, March 31, 2016 1:17:59 PM
> Subject: [Bioc-devel] Build fails on windows: R_igraph_make_weak_ref not	available

> Hi all,
> the build of our package TRONCO fails with this error on the Windows test
> machine:
> 
> Error: processing vignette 'vignette.Rnw' failed with diagnostics:
> "R_igraph_make_weak_ref" not available for .Call() for package "igraph"
> Execution halted
> 
> as reported in
> http://bioconductor.org/checkResults/devel/bioc-LATEST/TRONCO/moscato2-buildsrc.html
> 
> After a rapid check I've found other packages with the same problem:
> 
> http://bioconductor.org/checkResults/devel/bioc-LATEST/BiRewire/moscato2-buildsrc.html
> http://bioconductor.org/checkResults/devel/bioc-LATEST/cellTree/moscato2-buildsrc.html
> http://bioconductor.org/checkResults/devel/bioc-LATEST/clipper/moscato2-buildsrc.html
> ...
> 
> I can't reproduce the error. Any suggestion on how to solve this?
> 
> Thanks
> 
> --
> Luca De Sano
> Research Associate
> 
> Department of Informatics, Systems and Communication
> University of Milan Bicocca
> 
> Institute of Biomembranes and Bioenergetics of the Italian National
> Research Council (IBBE-CNR)
> 
> email: l.desano at campus.unimib.it
> PEC: luca.desano at pec.it
> 
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> 
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