[Bioc-devel] BioC check error for flowClust on windows

Dan Tenenbaum dtenenba at fredhutch.org
Fri Jul 15 23:01:47 CEST 2016


When you don't see a specific error message, it's often a hint that R actually crashed (popped up a dialog box that you can't see in the build report. 

And indeed that is the case here. 

I can reproduce it easily as follows: 

R --arch i386 

library(flowClust) 
example(flowClust) 

It works fine under the default (x64) architecture. Did you test it under i386? 

Here's the build report url, BTW: 

https://bioconductor.org/checkResults/devel/bioc-LATEST/flowClust/moscato1-checksrc.html 

By debugging the flowClust() function I can see that the crash happens after invoking .flowClustK() via mclapply(). 

Dan 

> From: "Mike" <wjiang2 at fhcrc.org>
> To: "bioc-devel" <Bioc-devel at r-project.org>
> Sent: Friday, July 15, 2016 1:53:37 PM
> Subject: [Bioc-devel] BioC check error for flowClust on windows

> Hi,

> Here is the CHECK report for flowClust on moscato1. There is not pacific
> error message on that page and I can't reproduce it on my local windows.

> Mike

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> Bioc-devel at r-project.org mailing list
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