[Bioc-devel] Build reports not updated

Hervé Pagès hpages at fredhutch.org
Mon Jul 11 20:39:06 CEST 2016


Hi Chen Hao,

The script that takes care of propagating the packages didn't run
properly. This should be fixed now and the new version of cytofkit
(1.4.8) will become available in the next hour or so.

Cheers,
H.

On 07/10/2016 06:33 PM, Chen Hao wrote:
> Dear Bioconductor core team,
>
> My latest commit of package cytofkit (version 1.4.8) to Bioconductor was
> built successfully according to the report
> http://bioconductor.org/checkResults/release/bioc-LATEST/cytofkit/.
> However the web page still present the old version (1.4.7)
> https://www.bioconductor.org/packages/release/bioc/html/cytofkit.html.
>
> Could you help take a look? We have an urgent need to provide the latest
> version (1.4.8) for a journal paper review.
>
> Thanks very much.
>
> Best Regards,
> Chen Hao
>
>> On 8 Jul 2016, at 1:52 PM, Monther Alhamdoosh <m.hamdoosh at gmail.com
>> <mailto:m.hamdoosh at gmail.com>> wrote:
>>
>> Hi Chen,
>>
>> You may check now. My package was built last night.
>>
>> Cheers,
>> Monther
>>
>> On Fri, Jul 8, 2016 at 3:43 PM, Chen Hao
>> <chen_hao at immunol.a-star.edu.sg
>> <mailto:chen_hao at immunol.a-star.edu.sg>> wrote:
>>
>>     Dear Monther,
>>
>>     There seems no building yesterday. Do you have any good news for
>>     the next building?
>>     I have a package(cytofkit) with important updating need to
>>     replaced the old one.
>>
>>     Best Regards,
>>     Chen Hao
>>
>>     > On 7 Jul 2016, at 8:57 AM, Hervé Pagès <hpages at fredhutch.org
>>     <mailto:hpages at fredhutch.org>> wrote:
>>     >
>>     > Hi Monther,
>>     >
>>     > On 07/06/2016 05:05 PM, Monther Alhamdoosh wrote:
>>     >> I just noticed that the latest snapshot of the build reports
>>     was based on
>>     >> Sunday 3rd. Has been any change to the building cycle of
>>     software packages?
>>     >
>>     > No changes to the build schedule. We're still trying to run the
>>     software
>>     > builds every day but have had many fatal build system failures
>>     in the
>>     > last 3 weeks or so. As a result, we've had many days without an
>>     updated
>>     > build report. The situation is particularly serious on Windows
>>     > (moscato1) where we haven't been able to complete a full build run
>>     > for at least 3 weeks. We're actively working on this.
>>     >
>>     > Hopefully we'll have an updated build report tomorrow (Jul 7). If we
>>     > are lucky, it might even contain results for Windows. Fingers
>>     crossed...
>>     >
>>     > H.
>>     >
>>     >>
>>     >> Cheers,
>>     >> Monther
>>     >>
>>     >>      [[alternative HTML version deleted]]
>>     >>
>>     >> _______________________________________________
>>     >> Bioc-devel at r-project.org <mailto:Bioc-devel at r-project.org>
>>     mailing list
>>     >> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>     >>
>>     >
>>     > --
>>     > Hervé Pagès
>>     >
>>     > Program in Computational Biology
>>     > Division of Public Health Sciences
>>     > Fred Hutchinson Cancer Research Center
>>     > 1100 Fairview Ave. N, M1-B514
>>     > P.O. Box 19024
>>     > Seattle, WA 98109-1024
>>     >
>>     > E-mail: hpages at fredhutch.org <mailto:hpages at fredhutch.org>
>>     > Phone:  (206) 667-5791
>>     > Fax:    (206) 667-1319
>>     >
>>     > _______________________________________________
>>     > Bioc-devel at r-project.org <mailto:Bioc-devel at r-project.org>
>>     mailing list
>>     > https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>
>>
>

-- 
Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M1-B514
P.O. Box 19024
Seattle, WA 98109-1024

E-mail: hpages at fredhutch.org
Phone:  (206) 667-5791
Fax:    (206) 667-1319



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