[Bioc-devel] Build error in released version
Zhu, Lihua (Julie)
Julie.Zhu at umassmed.edu
Fri Jul 1 23:23:08 CEST 2016
I just noticed that the released version of GUIDEseq failed at build stage, which did not occur previously and I did not make any change to the release version.
The error points to the GAlignmentPairs container. Is this an intended change and should I modify my code to accommodate the change? If yes, what is the rational to enforce the rule that
GAlignmentPairs container supports pairs where the 2 alignments are on opposite strands of the same chromosome?
Thanks for your help!
Error in .local(x, ...) :
For some pairs in 'x', the 2 alignments are not on opposite strands. Cannot
associate a strand to them. Note that the GAlignmentPairs container only
supports pairs where the 2 alignments are on opposite strands of the same
chromosome at the moment.
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