[Bioc-devel] question about citation file

Samuel E Zimmerman sezimmer at einstein.yu.edu
Tue Feb 2 16:37:20 CET 2016


That is exactly what I forgot to do. Thanks! One more question. Since I am doing a bug fix, I want to put the changes into my development version. If my devel version is 1.1.4 should my release version become 1.2.0?

Thank you very much for all your help.

Best,
Sam
________________________________________
From: Dan Tenenbaum [dtenenba at fredhutch.org]
Sent: Friday, January 29, 2016 3:40 PM
To: Samuel E Zimmerman
Cc: bioc-devel
Subject: Re: [Bioc-devel] question about citation file

I think you forgot to 'svn add' the CITATION file.
Dan


----- Original Message -----
> From: "Samuel E Zimmerman" <sezimmer at einstein.yu.edu>
> To: "bioc-devel" <bioc-devel at r-project.org>
> Sent: Friday, January 29, 2016 6:34:49 AM
> Subject: [Bioc-devel] question about citation file

> Hi Everyone,
>
> I just uploaded a new version of my package "pathVar" to the development branch
> of bioconductor. The goal was to change the citation on the landing page of the
> package. Currently the citation looks like this:
>
>
> Mar J, torrente Ld and Zimmerman S (2015). pathVar: Methods to Find Pathways
> with Significantly Different Variability. R package version 1.1.0.
>
>
> However, I created a new CITATION file in the inst directory of my package.
> Below is the contents of the CITATION file
>
>
> year <- sub("-.*", "", meta$Date)
> note <- sprintf("R package version %s", meta$Version)
>
> bibentry(bibtype = "Manual",title="pathVar: Methods to Find Pathways with
> Significantly Different Variability", author = c(person("Laurence","de
> Torrente"),person("Samuel","Zimmerman"),person("Jessica","Mar")),year = year,
> note = note,
> textVersion = paste("de Torrente L, Zimmerman S, and Mar J (2015). pathVar:
> Methods to Find Pathways with Significantly Different Variability. R package
> version 1.1.2"))
>
> Does anyone know why this is being ignored?
>
> Also here is a link to the landing page of the devel version of the package:
> https://www.bioconductor.org/packages/3.3/bioc/html/pathVar.html
>
> Thank you all very much for your help on this mailing list.
>
> Best,
> Sam
>
>
>       [[alternative HTML version deleted]]
>
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