[Bioc-devel] BiocCheck failing

Dan Tenenbaum dtenenba at fredhutch.org
Wed Sep 30 23:15:46 CEST 2015



----- Original Message -----
> From: "Samuel E Zimmerman" <sezimmer at einstein.yu.edu>
> To: bioc-devel at r-project.org
> Sent: Wednesday, September 30, 2015 2:02:06 PM
> Subject: [Bioc-devel] BiocCheck failing
> 
> Hi everyone,
> 
> I just submitted a package to Bioconductor. All the tests passed
> except for the BiocCheck step in the "Mac OS X Mavericks
> (10.9.5)/x86_64" OS. The version of BiocCheck used was 1.5.9 and the
> error is below.
> 
> 
> Error in curl::curl_fetch_memory(url, handle = handle) :
>   Timeout was reached
> Calls: <Anonymous> ... request_fetch -> request_fetch.write_memory ->
> <Anonymous> -> .Call
> Execution halted
> 
> This error only occurs in the Mavericks OS. All the tests pass Snow
> Leopard, Linux, and Windows Server. Does anyone know what could
> account for this error?
> 

It's an internal issue with BiocCheck on that machine. We will investigate/resolve it and you can ignore that error.

Dan


> Thank you very much.
> 
> Best,
> Sam
> 
> 	[[alternative HTML version deleted]]
> 
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