[Bioc-devel] Gviz: implementing support for FaFiles from AnnotationHub

[Rainer Johannes]

well yes, I just need this stuff, thus I’m implementing it :)

Shouldn’t take too long until you get some files (have to add some info to the documentation and to the vignette).

cheers, jo

> On 09 Nov 2015, at 16:11, Hahne, Florian <florian.hahne at novartis.com> wrote:
> 
> Wow, you are busy :-)
> I will just wait until I receive all of you patches before adding them to
> the official package release.
> Florian
> 
> On 09/11/15 16:08, "Bioc-devel on behalf of Rainer Johannes"
> <bioc-devel-bounces at r-project.org on behalf of Johannes.Rainer at eurac.edu>
> wrote:
> 
>> Dear All, dear Florian,
>> 
>> I¹m currently working on a Gviz-hack that would enable to use the FaFiles
>> provided from AnnotationHub directly as SequenceTracks in Gviz. I think
>> that might be a nice addition, since that way both Ensembl based
>> annotations (e.g. as EnsDbs) and Ensembl genome fasta files (provided by
>> AnnotationHub) could be used.
>> 
>> So, Florian, eventually I¹m going to send you some more files.
>> 
>> cheers, jo
>> 
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>