[Bioc-devel] Gviz: implementing support for FaFiles from AnnotationHub

Rainer Johannes Johannes.Rainer at eurac.edu
Mon Nov 9 16:08:45 CET 2015


Dear All, dear Florian,

I’m currently working on a Gviz-hack that would enable to use the FaFiles provided from AnnotationHub directly as SequenceTracks in Gviz. I think that might be a nice addition, since that way both Ensembl based annotations (e.g. as EnsDbs) and Ensembl genome fasta files (provided by AnnotationHub) could be used.

So, Florian, eventually I’m going to send you some more files.

cheers, jo



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