[Bioc-devel] RangedSummarizedExperiment

Elena Grassi grassi.e at gmail.com
Thu Jun 18 12:41:28 CEST 2015


I'm writing as long as I am struggling a bit to keep the pace of
RangedSummarizedExperiment in my package roar, whose main class
contains RangedSummarizedExperiment to hold some of the data.
Sometimes the developers fix issues for me but I would like to ease
their work as much as possible but for example today I stumbled upon

that is related to the fact that I build a RoarDataset object without
rowRanges, colData etc at the beginning of the analysis and I fill
them later.

My questions are:
- apart from looking around the svn logs and source code to understand
what's going on have I missed some mail here or other information
about the roadmap for what will come for SummarizedExperiment?
- it would be better to avoid extending such a class and instead
simply having another slot to avoid such initializations issues?


$ pom

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