[Bioc-devel] Importing classes into NAMESPACE

[Karolis Uziela]

Hi,

R 3.2 check results give this NOTE for my package ("prebs"):
granges_from_cdf: no visible global function definition for ‘GRanges’
granges_from_cdf: no visible global function definition for ‘Rle’
granges_from_cdf: no visible global function definition for ‘IRanges’
perform_rpa: no visible global function definition for ‘ExpressionSet’

I get this note for all the classes that I use in my package. Does it mean
that I incorrectly import classes into NAMESPACE file?

In the NAMESPACE file I have:

importClassesFrom(Biobase,ExpressionSet)

importClassesFrom(GenomicRanges,GRanges)

importClassesFrom(IRanges,IRanges)

importClassesFrom(S4Vectors,Rle)
Regards,
Karolis

-- 

Karolis Uziela

PhD student
Science for Life Laboratory
Box 1031
17121 Solna, Sweden
Mob. +46 729 120 395

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