[Bioc-devel] 'semantically rich' subsetting of SummarizedExperiments
MEC at stowers.org
Mon Sep 22 16:17:14 CEST 2014
>shows some modifications to [ that allow subsetting of SE by
>gene or pathway name
Without reading the code, do you intend that SE[i,j] will , if i is provided as vector of string, will subset those rows where the name of the GRanges == i?
>it may be premature to work at the [ level. Kasper suggested defining
>a suite of subsetBy operations that would accomplish this
Reminder of a little background to where we are now, with warnings of lurking dragons:
>i think we could get something along these lines into the release without
>too much more work. votes?
Abstaining for now.
Thanks - the topic is dear to me too.
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