[Bioc-devel] Submitting a workflow

Michael Love michaelisaiahlove at gmail.com
Wed Sep 3 16:10:50 CEST 2014


Thanks. I didn't poke around enough. Maybe there could be a link from

http://www.bioconductor.org/help/workflows/

for "How to contribute a workflow"

On Wed, Sep 3, 2014 at 9:05 AM, Andrzej Oleś <andrzej.oles at gmail.com> wrote:
> Hi Mike,
>
> see also http://www.bioconductor.org/developers/how-to/workflows/
>
> If you author your vignette in markdown you could try using BiocStyle
> formatting, see
> http://www.bioconductor.org/packages/devel/bioc/vignettes/BiocStyle/inst/doc/HtmlStyle.html
>
> Best,
> Andrzej
>
>
> On Wed, Sep 3, 2014 at 2:59 PM, Vincent Carey
> <stvjc at channing.harvard.edu> wrote:
>> here's the guide i am aware of.  a link should be on the basic workflow
>> page as a 'how to'.
>>
>> https://hedgehog.fhcrc.org/bioconductor/trunk/madman/workflows/README.md
>>
>>
>> On Wed, Sep 3, 2014 at 7:47 AM, Michael Love <michaelisaiahlove at gmail.com>
>> wrote:
>>
>>> hi,
>>>
>>> I'd like to contribute a workflow, but I don't see a guide on how to
>>> submit a workflow on the website.
>>>
>>> Do the workflows have the same versioning system x.y.z as software
>>> packages?
>>>
>>> Is it possible to use the github bridge with workflows?
>>>
>>> thanks,
>>>
>>> Mike
>>>
>>> _______________________________________________
>>> Bioc-devel at r-project.org mailing list
>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>>
>>
>>         [[alternative HTML version deleted]]
>>
>> _______________________________________________
>> Bioc-devel at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel



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