[Bioc-devel] epivizr: Chromosom region always set to default
julian.gehring at embl.de
Thu Jun 5 22:40:16 CEST 2014
Looks all fine now, thanks for the fast fix!
On 04.06.2014 12:37, Hector Corrada Bravo wrote:
> Hi Julian,
> There was a bug after an update on the epiviz web app. A fix is now
> available on both devel and release github repos:
> https://github.com/epiviz/epivizr 
> https://github.com/epiviz/epivizr-release 
> Also available on svn and will be available on next build.
> PS. Let me know how things go!
> On Wed, Jun 4, 2014 at 2:41 PM, Julian Gehring
> <julian.gehring at embl.de> wrote:
>> When I try to start epivizr with a defined region of interest, the
>> region is always mapped to the default chromosome 11.
>> mz = startEpiviz(chr = "chr2", start = 1e5, end = 2e5)
>> yields the URL
>> and a view that is centered around chr11:100000-200000. It seems
>> that the defaults overwrite the chromosome location, both in the
>> latest version of 'epivizr' of bioc-release and bioc-devel. Am I
>> missing an important option to overwrite the default properly?
>> Best wishes
>  https://github.com/epiviz/epivizr
>  https://github.com/epiviz/epivizr-release
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