[Bioc-devel] Timeout during package installation

[Dan Tenenbaum]

On Tue, May 28, 2013 at 10:40 PM, Marcus Moeller <marcus.moeller at gmx.ch> wrote:
> Hi again,
>
>
>> On Mon, May 27, 2013 at 11:19 PM, Marcus Moeller <marcus.moeller at gmx.ch>
>> wrote:
>>>
>>> Hi all,
>>>
>>> since a while we often got timeouts during package installation using:
>>>
>>> /usr/bin/R --no-save --no-restore <<<
>>> 'source(\"http://bioconductor.org/biocLite.R\"); biocLite(\"$name\")
>>>
>>> Has there been any problems with the mirror/source server?
>>>
>>
>> Not that I'm aware of. What package were you trying to install and
>> what was the exact error message you received? Is the problem resolved
>> now?
>
>
> R-Rgraphviz is the package I am trying to install.
>
> But there are some other packages that timeout during installation, even
> from cran:


Which CRAN mirror are you using?
>
> [R-mboost]
> [hgu133a.db]
> [spatstat]
> [RBGL]
>
> R-Rgraphviz is the one that timeouts on every try.
>

You mean Rgraphviz?

And what is the error message you are seeing? And what is the output of
sessionInfo()?

Thanks,
Dan




> Greets
> Marcus