[Bioc-devel] deprecation of keepSeqlevels and renameSeqlevels

Hervé Pagès hpages at fhcrc.org
Tue May 21 23:37:03 CEST 2013


On 05/21/2013 02:34 PM, Hervé Pagès wrote:
>
>
> On 05/21/2013 08:00 AM, Michael Lawrence wrote:
[...]
>> So it looks like seqlevels<- is pretty powerful. Now I see that if I
>> scroll down to the examples in the man page, I find the actual
>> documentation. It's cool to learn that we can replace seqlevels on TxDb
>> objects.
>
> Has been working on TranscriptDb objects for more than

[This got truncated. Trying again...]

Has been working on TranscriptDb objects for more than a year. It also
works on BSgenome objects (with some restrictions) starting with BioC 2.12.

H.

-- 
Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
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