[Bioc-devel] BioC 2013: Talks and Workshops
mtmorgan at fhcrc.org
Fri Jun 14 19:47:02 CEST 2013
The conference schedule continues to mature, with a nearly complete line-up of
scientific talks and workshops. The early registration deadline is July 1;
neighboring hotels are filling up quickly.
Please distribute the attached poster to interested colleagues!
Morning Scientific Presentations
Olivier Elemento Cancer as a Darwinian process: insights from next-generation
sequencing • Levi Waldron Meta-analysis for prognostic and predictive gene
signatures of late-stage ovarian cancer • Fabian Gruber Extensive variation in
chromatin states across human individuals and populations • Josh Akey Tales of
human history from 6,500 exome sequences • Kasper Hansen A genome-wide look at
DNA methylation • New this year, short presentations from the Bioconductor
community: Gregoire Pau; Laurent Gatto; Rory Stark; Matthew McCall; Tim Triche.
Afternoon Bioconductor Software Workshops
R / Bioconductor for everyone • Analysis of RNA-Seq differential gene expression
and exon use with the DESeq2 and DEXSeq • From reads to genes in less than 10 R
commands• Efficient manipulation of high-throughput sequence data in
Bioconductor • ReportingTools: an automated result processing toolkit for high
throughput genomic analyses • Interactive visualization in Bioconductor using
Epivizr • Reproducible research using RStudio, knitr and git • Developing apps
with BaseSpaceR • Variant Calling with Bioconductor • Variant-transcription
factor-phenotype networks • Discovering gene regulatory mutations • minfi and
shinyMethyl: winning packages for methylation analysis • A Bioconductor pipeline
for ChIP-Seq experiments • Differential analysis of ChIP-seq data •
Cheminformatics of drug-like small molecule data • Accessing public data
repositories with Bioconductor • Annotations in Bioconductor • RGalaxy /
See you in Seattle!
Dr. Martin Morgan, PhD
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109
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