[Bioc-devel] R: developing a bioconductor package with TDD (RUnit)
Davide Rambaldi
davide.rambaldi at ieo.eu
Fri Jan 18 17:26:42 CET 2013
Hello, I am trying to follow the bioconductor RUnit guidelines (http://www.bioconductor.org/developers/unitTesting-guidelines/#duringDevelopment)
I have followed the the minimal setup so I have:
Suggests: RUnit, BiocGenerics in DESCRIPTION
BiocGenerics:::testPackage("MyPackage") in MyPackage/tests/runTests.R
and some test_XXX.R files in MyPackage/inst/unitTests/
If I run a single test files with:
library(RUnit)
source("LIBRARY FILES")
source("MyPackage/inst/unitTests/test_getKeywordValue.R")
test_getKeywordValue()
The test run (and fails when need to fail), but if I run
R CMD check MyPackage
The command say:
* checking tests ...
Running ‘runTests.R’
OK
But don't run my tests in MyPackage/inst/unitTests directory...
What I missing?
Platform: x86_64-apple-darwin9.8.0
R version 2.15.2 (2012-10-26)
Best Regards and thanks in Advance
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PLEASE NOTE MY NEW EMAIL ADDRESS
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Davide Rambaldi, PhD.
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IEO ~ MolMed
[e] davide.rambaldi at ieo.eu
[e] davide.rambaldi at gmail.com
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