[Bioc-devel] Course: Intermediate R / Bioconductor for High-Throughput Sequence Analysis, 14-15 Feb, Seattle

[Martin Morgan]

Bioconductors! Please join us for an intermediate course on use of R / 
Bioconductor for high-throughput sequence analysis, a brief outline of which is 
below.

More Information: https://secure.bioconductor.org/Seattle-Feb-2013/

Intermediate R / Bioconductor for High-Throughput Sequence Analysis introduces 
users with some R experience to common Bioconductor work flows for sequence 
analysis. The course involves a combination of presentations and hands-on 
exercises. Our starting point is BAM files created by aligning short reads to a 
reference genome. Topics include: exploratory analysis (GenomicRanges, 
Rsamtools); assessing differential expression of known genes (DESeq); detection, 
calling, and manipulation of variants (VariantTools, VariantAnnotation). We 
learn how to integrate results with curated gene and genomic annotations 
(GenomicFeatures), and to visualize results (GViz, ggbio).

See you in Seattle,

Martin
-- 
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

Location: Arnold Building M1 B861
Phone: (206) 667-2793