[Bioc-devel] makeTranscriptDBFromGFF v. Flybase GFF

[Cook, Malcolm]

Marc et. al.,

A colleague of mine (cc:ed) is experiencing memory bloat using makeTranscriptDBFromGFF on dmel GFF from Flybase.org

I told him of my success in using Ensembl's GTF-ization but that I would check in with you (et al).  

So....

Do you have any advice/warnings/gothcas/toldyasos/caveats re: applying makeTranscriptDBFromGFF to Flybase

Thanks!

Cheers,

Malcolm