[Bioc-devel] equivalent of seqselect,vector,Rle

Hervé Pagès hpages at fhcrc.org
Fri Dec 13 22:10:53 CET 2013

Hi Michael,

On 12/13/2013 01:03 PM, Michael Lawrence wrote:
> I used to use seqselect for subsetting ordinary R vectors by Ranges and
> Rle. IRanges:::extractROWS does this, but it's hidden behind the namespace.
> What is the public way of doing this?
> Maybe we just need to export extractROWS()? Or something with a better name?

I'll add [,vector,Ranges and [,vector,Rle methods (and probably also
[,factor,Ranges and [,factor,Rle). They'll just be wrappers to
IRanges:::extractROWS which I'd like to keep hidden.

Was not sure people where doing this on ordinary R vectors so was
waiting for someone to speak up.


> Michael
> 	[[alternative HTML version deleted]]
> _______________________________________________
> Bioc-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M1-B514
P.O. Box 19024
Seattle, WA 98109-1024

E-mail: hpages at fhcrc.org
Phone:  (206) 667-5791
Fax:    (206) 667-1319

More information about the Bioc-devel mailing list