[Bioc-devel] Biostrings kmer Positional Frequencies

[Dario Strbenac]

Hello,

I've recently discovered letterFrequencyInSlidingView in the Biostrings package. It does what I want, but on single letters. Are there plans to implement a k-mer version of this ? Something like a hybrid with nucleotideFrequency ?

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Dario Strbenac
PhD Student
University of Sydney
Camperdown NSW 2050
Australia