[Bioc-devel] getting Rscript for development version packages

[Dan Tenenbaum]

Hi Richard,


On Mon, Nov 26, 2012 at 10:04 AM, Richard Friedman
<friedman at cancercenter.columbia.edu> wrote:
> Dear Bioconductor Developers,
>
>         Released versions of Bioconductor packages generally come with an R script which
> contains what is done in the vignettes. Are these also available for development versions?
> If so, how can I get the script for a given package? I am interest in easyRNASeq in
> particular.
>

Yes, you can go to the package landing page for any package, here is
the url for the package landing page for the devel version of
easyRNASeq:

http://bioconductor.org/packages/release/bioc/html/easyRNASeq.html

On that page you will see a link for the vignette(s), in PDF, R, and Rnw form.
Here is the link to the R script extracted from the vignette:

http://bioconductor.org/packages/release/bioc/vignettes/easyRNASeq/inst/doc/easyRNASeq.R

Dan


> Thanks and best wishes,
> Rich
>
> Richard A. Friedman, PhD
> Associate Research Scientist,
> Biomedical Informatics Shared Resource
> Herbert Irving Comprehensive Cancer Center (HICCC)
> Lecturer,
> Department of Biomedical Informatics (DBMI)
> Educational Coordinator,
> Center for Computational Biology and Bioinformatics (C2B2)/
> National Center for Multiscale Analysis of Genomic Networks (MAGNet)
> Room 824
> Irving Cancer Research Center
> Columbia University
> 1130 St. Nicholas Ave
> New York, NY 10032
> (212)851-4765 (voice)
> friedman at cancercenter.columbia.edu
> http://cancercenter.columbia.edu/~friedman/
>
> In memoriam, Ray Bradbury
>
>
>         [[alternative HTML version deleted]]
>
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