[Bioc-devel] getting Rscript for development version packages

Dan Tenenbaum dtenenba at fhcrc.org
Mon Nov 26 19:09:05 CET 2012

Hi Richard,

On Mon, Nov 26, 2012 at 10:04 AM, Richard Friedman
<friedman at cancercenter.columbia.edu> wrote:
> Dear Bioconductor Developers,
>         Released versions of Bioconductor packages generally come with an R script which
> contains what is done in the vignettes. Are these also available for development versions?
> If so, how can I get the script for a given package? I am interest in easyRNASeq in
> particular.

Yes, you can go to the package landing page for any package, here is
the url for the package landing page for the devel version of


On that page you will see a link for the vignette(s), in PDF, R, and Rnw form.
Here is the link to the R script extracted from the vignette:



> Thanks and best wishes,
> Rich
> Richard A. Friedman, PhD
> Associate Research Scientist,
> Biomedical Informatics Shared Resource
> Herbert Irving Comprehensive Cancer Center (HICCC)
> Lecturer,
> Department of Biomedical Informatics (DBMI)
> Educational Coordinator,
> Center for Computational Biology and Bioinformatics (C2B2)/
> National Center for Multiscale Analysis of Genomic Networks (MAGNet)
> Room 824
> Irving Cancer Research Center
> Columbia University
> 1130 St. Nicholas Ave
> New York, NY 10032
> (212)851-4765 (voice)
> friedman at cancercenter.columbia.edu
> http://cancercenter.columbia.edu/~friedman/
> In memoriam, Ray Bradbury
>         [[alternative HTML version deleted]]
> _______________________________________________
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