[Bioc-devel] Rsamtools filterBam Functionality

Dario Strbenac D.Strbenac at garvan.org.au
Thu May 17 08:00:15 CEST 2012


I'm interested in filtering a BAM file by read ID. I've read in two BAM files of two different mappings of the same FASTQ file, found which IDs are unique to one of them, and want to create a BAM file of these. This doesn't look possible from the options available to filterBam. Could that be extended in a future release ?

Dario Strbenac
Research Assistant
Cancer Epigenetics
Garvan Institute of Medical Research
Darlinghurst NSW 2010

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