[Bioc-devel] Candidates for BiocGenerics

Benilton Carvalho beniltoncarvalho at gmail.com
Thu Mar 1 19:24:00 CET 2012


Thank you very much Herve! cheers, b

2012/3/1 Hervé Pagès <hpages at fhcrc.org>:
> Hi Benilton, Sean,
>
>
> On 03/01/2012 08:18 AM, Sean Davis wrote:
>>
>> On Thu, Mar 1, 2012 at 7:57 AM, Benilton Carvalho
>> <beniltoncarvalho at gmail.com>  wrote:
>>>
>>> Hi,
>>>
>>> I'm implementing a few things in oligo and I wonder if it'd make sense to
>>> have
>>>
>>> boxplot/coef/image/ncol/residuals
>>>
>>> defined in BiocGenerics?
>>>
>>> If it's only me using them, I'm happy to have everything in oligo.
>>>
>>> Thoughts?
>>
>>
>> It seems that if someone is proposing a generic for functionality
>> already in base R, that generic is by definition a good candidate for
>> inclusion in BiocGenerics.
>
>
> I agree.
>
>
>> Are there downsides to having this be a
>> criterion for inclusion?
>
>
> Not that I know of.
>
> I'll add boxplot, coef, image, ncol and residuals to BiocGenerics today.
> I'll also add nrow, NROW, NCOL and dim, which are all interconnected
> with ncol.
>
> Cheers,
> H.
>
>
>>
>> Sean
>>
>> _______________________________________________
>> Bioc-devel at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
>
>
> --
> Hervé Pagès
>
> Program in Computational Biology
> Division of Public Health Sciences
> Fred Hutchinson Cancer Research Center
> 1100 Fairview Ave. N, M1-B514
> P.O. Box 19024
> Seattle, WA 98109-1024
>
> E-mail: hpages at fhcrc.org
> Phone:  (206) 667-5791
> Fax:    (206) 667-1319



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