[Bioc-devel] make check timing
Hervé Pagès
hpages at fhcrc.org
Tue Oct 4 22:57:02 CEST 2011
Hi Kasper,
On 11-10-04 09:04 AM, Dan Tenenbaum wrote:
> Hi Kasper,
>
> On Oct 3, 2011 7:37 PM, "Kasper Daniel Hansen"<kasperdanielhansen at gmail.com>
> wrote:
>>
>> The current guideline is that it cannot take more than 5 minutes to
>> run R CMD check. It looks as if R-2.14 first run all R code in the
>> vignettes and then builds the vignette (!!). This implies that the
>> total time for R CMD check includes 2x time it takes to build
>> vignette. How is this handled wrt 5 minute limit?
Good point. I guess we should modify our guidelines to say something
like:
The package should require less than 5 minutes to run
R CMD check --no-rebuild-vignettes.
Using the --no-rebuild-vignettes option ensures that the
Sweave vignette is built only once.
Will do.
Cheers,
H.
>
> On the build system, check is run with the --no-vignettes option.
>
> Dan
>
>> Kasper
>>
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>
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>
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--
Hervé Pagès
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
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