[Bioc-devel] edgeR - gene annotation bug fixed

Davis McCarthy dmccarthy at wehi.EDU.AU
Fri Jun 18 07:25:36 CEST 2010

Hi all

On June 10, Raffaele Calogero reported a bug in edgeR related to the
association of gene annotations with tags. I am happy to report that
this bug has now been fixed. 

We have made changes to several functions to improve treatment of gene
annotations and tags with all zero counts are no longer
discarded. This will particularly improve the analysis of datasets with more than
two groups. These changes have recently been committed to the devel
version 1.7.4 and the release version 1.6.7 of edgeR.

Many thanks to Raffaele for reporting the bug.

Best wishes
Davis McCarthy

Davis J McCarthy
Research Technician
Bioinformatics Division
Walter and Eliza Hall Institute of Medical Research
1G Royal Parade, Parkville, Vic 3052, Australia
dmccarthy at wehi.edu.au

The information in this email is confidential and intend...{{dropped:6}}

More information about the Bioc-devel mailing list