[Bioc-devel] Need help on biomaRt

[Florian Hahne]

The problem was fixed by Duncan Temple Lang in the latest RCurl  
version 0.97-3 which is available from Omegahat (http://www.omegahat.org/RCurl/ 
)
The automatic updates on our build systems should pick this up any  
time now, so all you need is patience for one or two more days :)
Florian


On 28.05.2009, at 11:32, Julie Zhu wrote:

> Hi,
>
> With the help from Herve, we found out that the devel version of  
> biomaRt is
> broken with the new Rcurl version 095-1. This is confirmed by the  
> build
> system:
>
> http://bioconductor.org/checkResults/2.5/bioc-LATEST/biomaRt/wilson2-buildsr
> c.html
>
> As you can see, it's broken on Linux and Mac OS. It looks OK
> on the Window build machine because this machine is using an
> older version of RCurl (0.94-1).
>
> I am in the process of submitting a contributed package that relies on
> biomaRt and my package won't be passed to the reviewers until  
> biomaRt is
> fixed. Could someone please fix the devel version of biomaRt? Thanks  
> a lot
> for your kind help!
>
> Best regards,
>
> Julie
>
>
> *******************************************
> Julie Zhu, Ph.D
> Research Assistant Professor
> Program Gene Function and Expression
> University of Massachusetts Medical School
> 364 Plantation Street, Room 613
> Worcester, MA 01605
> http://www.umassmed.edu/pgfe/faculty/zhu.cfm
>
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