[Bioc-devel] ReadAffy and path expansion

[Ernest Turro]

In most recent version of affy, I find this new behaviour:

 > d <- ReadAffy("~/Desktop/Foo.CEL") # used to work
Error in read.affybatch(filenames = l$filenames, phenoData = l 
$phenoData,  :
   Could not open file ~/Desktop/Foo.CEL
 > path.expand("~/Desktop/Foo.CEL")
[1] "/Users/telos/Desktop/Foo.CEL"
 > d <- ReadAffy("/Users/telos/Desktop/Foo.CEL") # works

Is this a bug?

---


$platform
[1] "i386-apple-darwin8.10.1"

$arch
[1] "i386"

$os
[1] "darwin8.10.1"

$system
[1] "i386, darwin8.10.1"

$status
[1] ""

$major
[1] "2"

$minor
[1] "7.1"

$year
[1] "2008"

$month
[1] "06"

$day
[1] "23"

$`svn rev`
[1] "45970"

$language
[1] "R"

$version.string
[1] "R version 2.7.1 (2008-06-23)"