[Bioc-devel] pval in mas5calls()

cstrato cstrato at aon.at
Mon May 28 20:56:56 CEST 2007


Dear all,

Could it be that function mas5calls() no longer returns the p-values, 
since se.exprs does no longer exist?

I get:
pr.call <- mas5calls(pr)
call <-exprs(pr.call)
pval <-se.exprs(pr.call) ||
Error in function (classes, fdef, mtable)  :
        unable to find an inherited method for function "se.exprs", for 
signature "ExpressionSet"

Interestingly, the source code in "mas5.R" still creates an 
ExpressionSet with "se.exprs=p".

sessionInfo()
R version 2.5.0 (2007-04-23)
i386-apple-darwin8.9.1

locale:
C

attached base packages:
[1] "tools"     "stats"     "graphics"  "grDevices" "utils"     "datasets"
[7] "methods"   "base"    

other attached packages:
hgu95av2cdf        affy      affyio     Biobase
   "1.16.0"    "1.14.0"     "1.4.0"    "1.14.0"

Best regards
Christian



More information about the Bioc-devel mailing list