[Bioc-devel] eSet classes

Rob Scharpf rscharpf at jhsph.edu
Mon Jun 25 21:08:12 CEST 2007

> Hello,
> Our group has already contributed two R packages to Bioconductor  
> for CGH-array data analysis (MANOR and GLAD). We are currently  
> developping other methods for DNA microarray analysis, and are  
> considering using standard Biobase classes (eSet, ExpressionSet,  
> SnpSet) to implement new packages.
Hi Pierre,

If you begin working with SNP platforms (e.g., Affymetrix or  
Illumina), you might want to check out the class definitions in the  
packages oligo, beadarraySnp, and SNPchip.   The classes in these  
packages are extensions of eSet.

Best regards,


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