[Bioc-devel] some data packages available for testing
Nianhua Li
nli at fhcrc.org
Fri Sep 8 20:27:51 CEST 2006
Hi,
Some data packages are available at
http://www.bioconductor.org/packages/1.9/data/annotation/ for testing.
Version number is 1.13.0. Both source and windows binaries are there.
They were built by using R 2.4.0 alpha, AnnBuilder 1.11.11 and GO
1.13.0. Annotation data was downloaded from public databases on Aug 25
and from chip manufactures on Aug 29:
ag ggahomology hgug4110b mgu74b ncrhomology rtu34
agahomology gmahomology hgug4112a mgu74bv2 omyhomology scehomology
ath1121501 GO hsahomology mgu74c osahomology spohomology
athhomology hcg110 hu35ksuba mgu74cv2 pfahomology sschomology
btahomology hgfocus hu35ksubb mmuhomology PFAM taehomology
canine2 hgu133a hu35ksubc moe430a ptrhomology u133x3p
celegans hgu133a2 hu35ksubd moe430b rae230a vvihomology
celhomology hgu133b hu6800 mouse4302 rae230b
xenopuslaevis
cfahomology hgu133plus2 humanCHRLOC mouse430a2 rat2302 xlahomology
cinhomology hgu95a hvuhomology mouseCHRLOC ratCHRLOC xtrhomology
dmehomology hgu95av2 KEGG mu11ksuba rgu34a YEAST
drehomology hgu95b klahomology mu11ksubb rgu34b yeast2
drosgenome1 hgu95c mgrhomology mu19ksuba rgu34c ygs98
drosophila2 hgu95d mgu74a mu19ksubb rnohomology zebrafish
egohomology hgu95e mgu74av2 mu19ksubc rnu34 zmahomology
The following packages will be updated soon:
indac humanLLMappings mouseLLMappings ratLLMappings cMAP
hgug4100a hgug4101a hgug4111a hgug4410a hgug4410b mgug4104a
mgug4120a mgug4121a mgug4122a rgug4105a rgug4130a rgug4131a
Bug reports are highly appreciated. Thanks.
nianhua
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