[Bioc-devel] annotation package for Affymetrix Hum6000 array

[Seth Falcon]

lgautier at altern.org writes:

>> lgautier at altern.org writes:
>>> Since we are about Affymetrix chips and data, apparently there is a
>>> quirk
>>> with the example data in 'affydata' and the corresponding probe sequence
>>> package (the probe sets in the AffyBatch does not seem to match the
>>> probe
>>> sequences).
>>>
>>> I am not sure this is a big deal, but it might be handy to know for the
>>> people having code dealing with Affymetrix probe sequence and having
>>> examples for it
>>> (for example, it makes some of example in 'affypdnn' examples behave
>>> erratically).
>>
>> Can you give a bit more detail or an example?
>
> Sorry for the delay. I get a zillion things to do those days.

I understand how that goes :-)

Thanks for the details.  We'll look into it.

+ seth