[Bioc-devel] annotation package for Affymetrix Hum6000 array

Seth Falcon sfalcon at fhcrc.org
Thu Apr 27 16:20:28 CEST 2006


lgautier at altern.org writes:
> Since we are about Affymetrix chips and data, apparently there is a quirk
> with the example data in 'affydata' and the corresponding probe sequence
> package (the probe sets in the AffyBatch does not seem to match the probe
> sequences).
>
> I am not sure this is a big deal, but it might be handy to know for the
> people having code dealing with Affymetrix probe sequence and having
> examples for it
> (for example, it makes some of example in 'affypdnn' examples behave
> erratically).

Can you give a bit more detail or an example?



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