tsiR: An Implementation of the TSIR Model

An implementation of the time-series Susceptible-Infected-Recovered (TSIR) model using a number of different fitting options for infectious disease time series data. The manuscript based on this package can be found here <doi:10.1371/journal.pone.0185528>. The method implemented here is described by Finkenstadt and Grenfell (2000) <doi:10.1111/1467-9876.00187>.

Version: 0.4.3
Depends: R (≥ 3.1.0)
Imports: ggplot2, kernlab, reshape2, grid
Published: 2021-01-20
DOI: 10.32614/CRAN.package.tsiR
Author: Alexander D. Becker [aut, cre], Sinead E. Morris [ctb], Ottar N. Bjornstad [ctb]
Maintainer: Alexander D. Becker <adbecker at princeton.edu>
Contact: adbecker at princeton dot edu
License: GPL-3
NeedsCompilation: no
Materials: README
In views: Epidemiology
CRAN checks: tsiR results


Reference manual: tsiR.pdf


Package source: tsiR_0.4.3.tar.gz
Windows binaries: r-devel: tsiR_0.4.3.zip, r-release: tsiR_0.4.3.zip, r-oldrel: tsiR_0.4.3.zip
macOS binaries: r-release (arm64): tsiR_0.4.3.tgz, r-oldrel (arm64): tsiR_0.4.3.tgz, r-release (x86_64): tsiR_0.4.3.tgz, r-oldrel (x86_64): tsiR_0.4.3.tgz
Old sources: tsiR archive


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