treediff: Testing Differences Between Families of Trees

Perform test to detect differences in structure between families of trees. The method is based on cophenetic distances and aggregated Student's tests.

Version: 0.2.1
Depends: R (≥ 4.0.0)
Imports: adjclust, BiocGenerics, csaw, data.table, dplyr, InteractionSet, limma, methods, stats, SummarizedExperiment, reshape2, testthat, rlang, HiCDOC, purrr
Suggests: knitr, rmarkdown
Published: 2024-02-17
DOI: 10.32614/CRAN.package.treediff
Author: Nathalie Vialaneix ORCID iD [aut, cre], Gwendaelle Cardenas [aut], Marie Chavent [aut], Sylvain Foissac [aut], Pierre Neuvial ORCID iD [aut], Nathanael Randriamihamison [aut]
Maintainer: Nathalie Vialaneix <nathalie.vialaneix at>
License: GPL (≥ 3)
NeedsCompilation: no
Citation: treediff citation info
Materials: NEWS
CRAN checks: treediff results


Reference manual: treediff.pdf


Package source: treediff_0.2.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): treediff_0.2.1.tgz, r-oldrel (arm64): treediff_0.1.tgz, r-release (x86_64): treediff_0.2.1.tgz, r-oldrel (x86_64): treediff_0.1.tgz
Old sources: treediff archive


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