strawr: Fast Implementation of Reading/Dump for .hic Files

API for fast data extraction for .hic files that provides programmatic access to the matrices. It doesn't store the pointer data for all the matrices, only the one queried, and currently we are only supporting matrices (not vectors).

Version: 0.0.92
Depends: R (≥ 3.4.0)
Imports: Rcpp
LinkingTo: Rcpp
Published: 2024-07-16
DOI: 10.32614/CRAN.package.strawr
Author: Neva Cherniavsky Durand [aut, cre], Muhammad Saad Shamim [aut], Aiden Lab [cph]
Maintainer: Neva Cherniavsky Durand <neva at>
License: MIT + file LICENSE
NeedsCompilation: yes
SystemRequirements: libcurl: libcurl-devel (rpm) or libcurl4-openssl-dev (deb)
Materials: README
CRAN checks: strawr results


Reference manual: strawr.pdf


Package source: strawr_0.0.92.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): strawr_0.0.92.tgz, r-oldrel (arm64): strawr_0.0.92.tgz, r-release (x86_64): strawr_0.0.92.tgz, r-oldrel (x86_64): strawr_0.0.92.tgz
Old sources: strawr archive

Reverse dependencies:

Reverse imports: HicAggR, HiCExperiment, mariner, plotgardener, trackViewer


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