ruminate: A Pharmacometrics Data Transformation and Analysis Tool

Exploration of pharmacometrics data involves both general tools (transformation and plotting) and specific techniques (non-compartmental analysis). This kind of exploration is generally accomplished by utilizing different packages. The purpose of 'ruminate' is to create a 'shiny' interface to make these tools more broadly available while creating reproducible results.

Version: 0.2.2
Depends: R (≥ 4.2.0)
Imports: digest, dplyr, DT, flextable, formods (≥ 0.1.3), ggplot2, onbrand (≥ 1.0.3), PKNCA (≥ 0.10.2), plotly, rhandsontable, rlang, shiny, shinyAce, shinyWidgets, rxode2 (≥ 2.1.2), stats, stringr, tidyr, utils, yaml
Suggests: clipr, gridExtra, knitr, nlmixr2lib, nonmem2rx, prompter, rmarkdown, readxl, rxode2et, shinydashboard, testthat (≥ 3.0.0), ubiquity
Published: 2024-03-14
Author: John Harrold ORCID iD [aut, cre]
Maintainer: John Harrold <john.m.harrold at gmail.com>
BugReports: https://github.com/john-harrold/ruminate/issues
License: BSD_2_clause + file LICENSE
URL: https://ruminate.ubiquity.tools/
NeedsCompilation: no
Materials: README NEWS
In views: Pharmacokinetics
CRAN checks: ruminate results

Documentation:

Reference manual: ruminate.pdf
Vignettes: Deployment and Customization
Noncompartmental Analysis

Downloads:

Package source: ruminate_0.2.2.tar.gz
Windows binaries: r-devel: ruminate_0.2.2.zip, r-release: ruminate_0.2.2.zip, r-oldrel: ruminate_0.2.2.zip
macOS binaries: r-release (arm64): ruminate_0.2.2.tgz, r-oldrel (arm64): ruminate_0.2.2.tgz, r-release (x86_64): ruminate_0.2.2.tgz
Old sources: ruminate archive

Linking:

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