Implements a procedure to automatically generate 2D masks
for clusters on dimensional reduction plots from methods like
t-SNE (t-distributed stochastic neighbor embedding) or
UMAP (uniform manifold approximation and projection),
with a focus on single-cell RNA-sequencing data.
| Version: |
0.4.3 |
| Depends: |
R (≥ 3.5) |
| Imports: |
data.table, spatstat.geom (≥ 3.7-3), spatstat.explore, lifecycle, ggplot2, polyclip, polylabelr, ggforce, vctrs, rlang, cli, systemfonts (≥ 1.3.0), Rcpp |
| LinkingTo: |
Rcpp, BH |
| Suggests: |
testthat (≥ 3.1.5), rmarkdown, knitr, patchwork, Seurat, scales, SeuratObject, svglite, colorrepel (≥ 0.5.0) |
| Published: |
2026-07-30 |
| DOI: |
10.32614/CRAN.package.mascarade |
| Author: |
Alexey Sergushichev [aut, cre] |
| Maintainer: |
Alexey Sergushichev <alsergbox at gmail.com> |
| BugReports: |
https://github.com/alserglab/mascarade/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://alserglab.github.io/mascarade/ |
| NeedsCompilation: |
yes |
| Materials: |
NEWS |
| CRAN checks: |
mascarade results |