homologene: Quick Access to Homologene and Gene Annotation Updates

A wrapper for the homologene database by the National Center for Biotechnology Information ('NCBI'). It allows searching for gene homologs across species. Data in this package can be found at <ftp://ftp.ncbi.nih.gov/pub/HomoloGene/build68/>. The package also includes an updated version of the homologene database where gene identifiers and symbols are replaced with their latest (at the time of submission) version and functions to fetch latest annotation data to keep updated.

Depends: R (≥ 3.1.2)
Imports: dplyr (≥ 0.7.4), magrittr (≥ 1.5), purrr (≥ 0.2.5), readr (≥ 1.3.1), R.utils (≥ 2.8.0)
Suggests: testthat (≥ 1.0.2)
Published: 2019-03-28
DOI: 10.32614/CRAN.package.homologene
Author: Ogan Mancarci [aut, cre], Leon French [ctb]
Maintainer: Ogan Mancarci <ogan.mancarci at gmail.com>
BugReports: https://github.com/oganm/homologene/issues
License: MIT + file LICENSE
URL: https://github.com/oganm/homologene
NeedsCompilation: no
Materials: README NEWS
CRAN checks: homologene results


Reference manual: homologene.pdf


Package source: homologene_1.
Windows binaries: r-devel: homologene_1., r-release: homologene_1., r-oldrel: homologene_1.
macOS binaries: r-release (arm64): homologene_1., r-oldrel (arm64): homologene_1., r-release (x86_64): homologene_1., r-oldrel (x86_64): homologene_1.
Old sources: homologene archive

Reverse dependencies:

Reverse imports: orthogene


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