func2vis: Clean and Visualize Over Expression Results from
Provides functions to have visualization and clean-up of enriched gene ontologies (GO) terms,
protein complexes and pathways (obtained from multiple databases) using 'ConsensusPathDB'
from gene set over-expression analysis. Performs clustering of pathway based on similarity
of over-expressed gene sets and visualizations similar to Ingenuity Pathway Analysis (IPA)
when up and down regulated genes are known. The methods are described in a paper currently
submitted by Orecchioni et al, 2020 in Nanoscale.
||ggplot2, igraph, devtools, ggrepel, grDevices, R (≥ 3.6)
||Raghvendra Mall [aut, cre]
||Raghvendra Mall <raghvendra5688 at gmail.com>
||GPL (≥ 3)
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