drugsens: Automated Analysis of 'QuPath' Output Data and Metadata
Extraction
A comprehensive toolkit for analyzing microscopy data output from 'QuPath' software.
Provides functionality for automated data processing, metadata extraction, and statistical
analysis of imaging results. The methodology implemented in this package is based on
Labrosse et al. (2024) <doi:10.1016/j.xpro.2024.103274> "Protocol for quantifying drug
sensitivity in 3D patient-derived ovarian cancer models", which describes the complete
workflow for drug sensitivity analysis in patient-derived cancer models.
| Version: |
0.1.0 |
| Depends: |
R (≥ 4.2) |
| Imports: |
dplyr, ggplot2, ggpubr, knitr, roxygen2, stats, stringr, tidyr, tidyselect, utils, testthat (≥ 3.0.0) |
| Published: |
2025-01-16 |
| DOI: |
10.32614/CRAN.package.drugsens |
| Author: |
Flavio Lombardo 
[aut, cre, cph],
Ricardo Coelho [cph],
Ovarian Cancer Research [cph],
University of Basel and University Hospital Basel [cph] |
| Maintainer: |
Flavio Lombardo <flavio.lombardo at unibas.ch> |
| BugReports: |
https://git.scicore.unibas.ch/ovca-research/drugsens/-/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://git.scicore.unibas.ch/ovca-research/drugsens/ |
| NeedsCompilation: |
no |
| SystemRequirements: |
QuPath™ 4.0.0 or higher |
| Materials: |
README NEWS |
| CRAN checks: |
drugsens results |
Documentation:
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