To cite biomod2 in publications, please use (and check your version):
Guéguen M, Blancheteau H, Lemaire-Patin R, Thuiller W (2026). “'biomod2' - extending presence-absence species distribution models to multiple data types.” Ecography, 2026(9), e08588. doi:10.1002/ecog.08588. R package version 4.3-4-7 (2026-10-07), https://biomodhub.github.io/biomod2/.
Corresponding BibTeX entry:
@Article{,
author = {Maya Guéguen and Hélène Blancheteau and Rémi
Lemaire-Patin and Wilfried Thuiller},
title = {'biomod2' - extending presence-absence species
distribution models to multiple data types},
journal = {Ecography},
volume = {2026},
number = {9},
pages = {e08588},
year = {2026},
doi = {10.1002/ecog.08588},
url = {https://biomodhub.github.io/biomod2/},
note = {R package version 4.3-4-7 (2026-10-07)},
keywords = {abundance, habitat distribution model, reproducibility,
species distribution model},
abstract = {The R package 'biomod2' is one of the most widely used
and versatile tools for species distribution modelling (SDM),
enabling ecologists to calibrate, evaluate, and project
species-environment relationships across space and time using
multiple modelling algorithms and ensemble forecasting. Here, we
present its latest and most comprehensive version, which
substantially expands its scope by accommodating diverse
ecological data types within a unified modelling workflow.
Importantly, 'biomod2' is designed to handle each data type (e.g.
presence-only, presence-absence, counts, multi-class abundance,
or relative/absolute abundance) independently, ensuring
methodological rigor and avoiding the integration of incompatible
data formats or model types. This approach allows users to model
biomass, land cover, habitat suitability, and other ecological
metrics without conflating distinct data streams or analytical
frameworks. We have fully restructured the workflow to improve
usability and reproducibility, introducing clearer function
organization, standardized parameter names, and substantially
revised documentation. The update also includes new
methodological features such as enhanced cross-validation
schemes, improved pseudo-absence selection strategies, expanded
model parametrization options, additional algorithms, and new
tools for exploring and visualizing outputs. Together, these
developments provide a more flexible, transparent, and easily
shareable framework for SDM, supporting comparison, uncertainty
analyses, and ensemble predictions across a broad range of
ecological questions.},
}