Changes in VAM v1.1.0 ======================== * Updated to support Seurat v5.0.0 Changes in VAM v1.0.0 ======================== * Added support for gene weights. Changes in VAM v0.5.3 ======================== * Fixed handling of gene sets with a single member. * Fixed logic in vam() when gamma=T and center=F. Changes in VAM v0.5.2 ======================== * Corrected conditional test for Seurat package in vignettes. Changes in VAM v0.5.1 ======================== * Update for new SCTransform metadata structure * Added new short SCTransform vignette Changes in VAM v0.5.0 ======================== * Support for Seurat v4.0.0 * Moved static vignette PDFs to vignettes folder. * Updated vamForCollection() to tolerate gene.set.collection objects specified as lists of gene ID vectors. Changes in VAM v0.4.0 ======================== * Initial release to CRAN.