Version: 1.0.1 Date: 2017-07-04 o fixed some typos in the manual pages o added vignette (publication) o added special input support for function "load_timeseries()" to be able to load multi-column timeseries data ------------------------ Version: 1.0.0 Date: 2017-02-24 o fixed issue with proper residue display when sub-selection was done in function 'dssp()' o fixed issue with bin-expansion in function 'load_noe()' o removed unnecessary input parameters from several functions o added 'stride' to function 'load_dssp_ts()' o changed parameters of function 'load_rmsf()' o renamed functions 'load_dssp_summary()' and 'dssp_summary()' into 'load_dssp()' and 'dssp()', respectively o added additional box lines to function 'ramachandran()' for 'plotType = "comic"' o changed colour coding to be more consistent in function 'ramachandran()' o added 'barScaleFactor' to function 'dssp_ts()' to account for the possibility that very small peptides might be plotted o added GROMACS support for functions: 'load_dssp()', 'load_dssp_ts()', 'load_hbond()', 'load_hbond_ts()', 'load_clusters()', 'load_clusters_ts()', 'load_ramachandran()' and 'load_xrmsd()' o added AMBER support for functions: 'load_rmsd()', 'load_ramachandran()', 'load_dssp()', 'load_dssp_ts()', 'load_hbond()', 'load_clusters()', 'load_clusters_ts()', 'load_rmsf()' and 'load_xrmsd()' o added function 'load_XPM()' to load "X PixMap" data as commonly produced by GROMACS o added functions 'find_Nth_occurrence()', 'split_GROMACS_atomnames()' and 'split_AMBER_atomnames()' to the collection of helper functions o added parameter 'showMultipleInteractions' to function 'hbond()' to represent multi- or hybrid hydrogen bond donors and acceptors o fixed time-axis issue in functions 'rmsd()' and 'rmsf()' o changed all names on example input files according to convention ------------------------ Version: 0.3.1 Date: 2016-04-28 o added 'printErrors' flag to function 'TIcurve()' o added 'errorBarThreshold' flag to function 'TIcurve()' o fixed bug in function 'ramachandran()' for type "fancy" o added return information to functions where appropriate o fixed 'xrmsd()' ellipsis o changed some phrases and the title ------------------------ Version: 0.3 Date: 2016-02-15 o added multiple vector selection by hydrogen bond identifiers to function 'hbond_ts()' o added argument 'printValues' functionality to function 'TIcurve()' o removed hard-coding for the filenames of function 'load_dssp_ts()' o included new functions 'load_timeseries()' and 'timeseries()' o added argument 'legendPosition' to functions 'rmsd()' and 'rmsf()' o added labels for axes for function 'xrmsd()' o renamed title ("Analyses") to comply with the publication title ------------------------