LOG of the CHANGES in the package GenomicTools.fileHandler ----------------------------------------------------- Version with odd last numbers are development versions. Stable releases have even version numbers: ----------------------------------------------------- Version 0.1.5.x: 1: importFA does not rely on alternating rows anymore 2: importSTARLog imports now more statistics and is able to import recursively several log files 3: plotTotalReads function added 4: summary.STARLog function added 5: plotUniquelyReads function added and also added to the summary function 6: importSTARLog handles now STAR2.7.2b log files (at the moment ONLY final.log) 7: crucial bugfix in variant coding for importVCF 8: print.gtf function added 9: importGTF: Bugfix in case the features are substring from each other Version 0.1.4 (Stable Version): * Improvements of summary functions * Minor bugfixes Version 0.1.2 (Stable Version): * Initial commit with most import I/O functions added Planned next features * importVCF should also support gz files located on a remote server, so far only local support (importVCF) Version 0.1.1 (Developer Version): * Initial package development