FishResp: Analytical Tool for Aquatic Respirometry

Calculates metabolic rate of fish and other aquatic organisms measured using an intermittent-flow respirometry approach. The tool is used to run a set of graphical QC tests of raw respirometry data, correct it for background respiration and chamber effect, filter and extract target values of absolute and mass-specific metabolic rate. Experimental design should include background respiration tests and measuring of one or more metabolic rate traits. The R package is ideally integrated with the pump controller 'PumpResp' and the DO meter 'SensResp' (open-source hardware by FishResp). Raw respirometry data can be also imported from 'AquaResp' (free software), 'AutoResp' ('LoligoSystems'), 'OxyView' ('PreSens'), 'Pyro Oxygen Logger' ('PyroScience') and 'Q-box Aqua' ('QubitSystems'). More information about the R package 'FishResp'is available in the publication by Morozov et al. (2019) <doi:10.1093/conphys/coz003>.

Version:	1.1.2
Depends:	R (≥ 3.0.0)
Imports:	chron, lattice, mclust, rMR, respirometry
Published:	2024-11-12
DOI:	10.32614/CRAN.package.FishResp
Author:	Sergey Morozov [aut, cre], Scott McCairns [aut], Juha Merila [ctb]
Maintainer:	Sergey Morozov <sergey.morozov at helsinki.fi>
License:	GPL-3
URL:	https://fishresp.org
NeedsCompilation:	no
SystemRequirements:	Display resolution >= 1280x800; RAM >= 4GB
Citation:	FishResp citation info
Materials:	README NEWS
CRAN checks:	FishResp results

Documentation:

Reference manual:

FishResp.pdf

Downloads:

Package source:	FishResp_1.1.2.tar.gz
Windows binaries:	r-devel: FishResp_1.1.2.zip, r-release: FishResp_1.1.2.zip, r-oldrel: FishResp_1.1.2.zip
macOS binaries:	r-release (arm64): FishResp_1.1.2.tgz, r-oldrel (arm64): FishResp_1.1.2.tgz, r-release (x86_64): FishResp_1.1.2.tgz, r-oldrel (x86_64): FishResp_1.1.2.tgz
Old sources:	FishResp archive

Reverse dependencies:

Reverse suggests:

respR

Linking:

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