Last updated on 2024-07-24 12:21:06 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.8.0 | 22.69 | 361.47 | 384.16 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.8.0 | 17.54 | 261.30 | 278.84 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.8.0 | 471.29 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.8.0 | 497.64 | OK | |||
| r-devel-windows-x86_64 | 0.8.0 | 23.00 | 296.00 | 319.00 | OK | |
| r-patched-linux-x86_64 | 0.8.0 | 30.42 | 354.42 | 384.84 | OK | |
| r-release-linux-x86_64 | 0.8.0 | 24.46 | 336.36 | 360.82 | OK | |
| r-release-macos-arm64 | 0.8.0 | 139.00 | OK | |||
| r-release-macos-x86_64 | 0.8.0 | 193.00 | OK | |||
| r-release-windows-x86_64 | 0.8.0 | 27.00 | 293.00 | 320.00 | OK | |
| r-oldrel-macos-arm64 | 0.8.0 | 137.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.8.0 | 345.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.8.0 | 28.00 | 374.00 | 402.00 | OK |
Version: 0.8.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘clustered.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/clustered_files/figure-html/unnamed-chunk-5-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 12034 bytes
Input file size = 12124 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9797
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9797
Output IDAT size = 9797 bytes (2237 bytes decrease)
Output file size = 9875 bytes (2249 bytes = 18.55% decrease)
--- finished re-building ‘clustered.Rmd’
--- re-building ‘corelationmat.Rmd’ using rmarkdown
--- finished re-building ‘corelationmat.Rmd’
--- re-building ‘correlated.Rmd’ using rmarkdown
--- finished re-building ‘correlated.Rmd’
--- re-building ‘customdist.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/customdist_files/figure-html/unnamed-chunk-6-1.png
576x288 pixels, 8 bits/pixel, 213 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 3108 bytes
Input file size = 3837 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 2732
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 2728
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 2728
Output IDAT size = 2728 bytes (380 bytes decrease)
Output file size = 2806 bytes (1031 bytes = 26.87% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/customdist_files/figure-html/unnamed-chunk-11-1.png
768x576 pixels, 8 bits/pixel, 244 colors in palette
Input IDAT size = 13068 bytes
Input file size = 13902 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11259
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11259
Output IDAT size = 11259 bytes (1809 bytes decrease)
Output file size = 12081 bytes (1821 bytes = 13.10% decrease)
--- finished re-building ‘customdist.Rmd’
--- re-building ‘double_dot_extension.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/double_dot_extension_files/figure-html/unnamed-chunk-9-1.png
480x288 pixels, 8 bits/pixel, 222 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 9977 bytes
Input file size = 10745 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9034
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 8739
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 8739
Output IDAT size = 8739 bytes (1238 bytes decrease)
Output file size = 8817 bytes (1928 bytes = 17.94% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/double_dot_extension_files/figure-html/unnamed-chunk-18-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26581 bytes
Input file size = 26695 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20943
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20943
Output IDAT size = 20943 bytes (5638 bytes decrease)
Output file size = 21021 bytes (5674 bytes = 21.25% decrease)
--- finished re-building ‘double_dot_extension.Rmd’
--- re-building ‘logisticCoefs.Rmd’ using rmarkdown
--- finished re-building ‘logisticCoefs.Rmd’
--- re-building ‘longitudinal.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/longitudinal_files/figure-html/unnamed-chunk-4-1.png
576x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 49877 bytes
Input file size = 50027 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41716
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41716
Output IDAT size = 41716 bytes (8161 bytes decrease)
Output file size = 41794 bytes (8233 bytes = 16.46% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/longitudinal_files/figure-html/unnamed-chunk-8-1.png
576x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21624 bytes
Input file size = 21726 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17073
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17073
Output IDAT size = 17073 bytes (4551 bytes decrease)
Output file size = 17151 bytes (4575 bytes = 21.06% decrease)
--- finished re-building ‘longitudinal.Rmd’
--- re-building ‘missing.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/missing_files/figure-html/unnamed-chunk-10-1.png
672x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18611 bytes
Input file size = 18713 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14756
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14756
Output IDAT size = 14756 bytes (3855 bytes decrease)
Output file size = 14834 bytes (3879 bytes = 20.73% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/missing_files/figure-html/unnamed-chunk-12-1.png
672x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18829 bytes
Input file size = 18931 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15060
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15060
Output IDAT size = 15060 bytes (3769 bytes decrease)
Output file size = 15138 bytes (3793 bytes = 20.04% decrease)
--- finished re-building ‘missing.Rmd’
--- re-building ‘ordinal.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/ordinal_files/figure-html/threshold-1.png
504x336 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18302 bytes
Input file size = 18404 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14483
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14483
Output IDAT size = 14483 bytes (3819 bytes decrease)
Output file size = 14561 bytes (3843 bytes = 20.88% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/ordinal_files/figure-html/plotB-1.png
504x336 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 12816 bytes
Input file size = 12906 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10162
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10162
Output IDAT size = 10162 bytes (2654 bytes decrease)
Output file size = 10240 bytes (2666 bytes = 20.66% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/ordinal_files/figure-html/unnamed-chunk-5-1.png
576x336 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19365 bytes
Input file size = 19467 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15496
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15496
Output IDAT size = 15496 bytes (3869 bytes decrease)
Output file size = 15574 bytes (3893 bytes = 20.00% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/ordinal_files/figure-html/plotNP-1.png
504x336 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 13018 bytes
Input file size = 13108 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10319
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10319
Output IDAT size = 10319 bytes (2699 bytes decrease)
Output file size = 10397 bytes (2711 bytes = 20.68% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/ordinal_files/figure-html/unnamed-chunk-10-1.png
576x336 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19668 bytes
Input file size = 19770 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15618
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15618
Output IDAT size = 15618 bytes (4050 bytes decrease)
Output file size = 15696 bytes (4074 bytes = 20.61% decrease)
--- finished re-building ‘ordinal.Rmd’
--- re-building ‘simstudy.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/simstudy_files/figure-html/unnamed-chunk-16-1.png
480x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19146 bytes
Input file size = 19248 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13914
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13914
Output IDAT size = 13914 bytes (5232 bytes decrease)
Output file size = 13992 bytes (5256 bytes = 27.31% decrease)
--- finished re-building ‘simstudy.Rmd’
--- re-building ‘spline.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/spline_files/figure-html/unnamed-chunk-2-1.png
576x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33347 bytes
Input file size = 33473 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24865
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24865
Output IDAT size = 24865 bytes (8482 bytes decrease)
Output file size = 24943 bytes (8530 bytes = 25.48% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/spline_files/figure-html/unnamed-chunk-2-2.png
576x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 37543 bytes
Input file size = 37669 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28860
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28860
Output IDAT size = 28860 bytes (8683 bytes decrease)
Output file size = 28938 bytes (8731 bytes = 23.18% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/spline_files/figure-html/unnamed-chunk-3-1.png
576x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 15012 bytes
Input file size = 15102 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11453
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11453
Output IDAT size = 11453 bytes (3559 bytes decrease)
Output file size = 11531 bytes (3571 bytes = 23.65% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/spline_files/figure-html/unnamed-chunk-3-2.png
576x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27698 bytes
Input file size = 27812 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20317
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20317
Output IDAT size = 20317 bytes (7381 bytes decrease)
Output file size = 20395 bytes (7417 bytes = 26.67% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/spline_files/figure-html/unnamed-chunk-5-1.png
576x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 13445 bytes
Input file size = 13535 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10646
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10646
Output IDAT size = 10646 bytes (2799 bytes decrease)
Output file size = 10724 bytes (2811 bytes = 20.77% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/spline_files/figure-html/unnamed-chunk-7-1.png
576x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46611 bytes
Input file size = 46749 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 31843
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 31843
Output IDAT size = 31843 bytes (14768 bytes decrease)
Output file size = 31921 bytes (14828 bytes = 31.72% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/spline_files/figure-html/unnamed-chunk-8-1.png
576x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 50781 bytes
Input file size = 50931 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 35638
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 35638
Output IDAT size = 35638 bytes (15143 bytes decrease)
Output file size = 35716 bytes (15215 bytes = 29.87% decrease)
--- finished re-building ‘spline.Rmd’
--- re-building ‘survival.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/survival_files/figure-html/unnamed-chunk-6-1.png
624x336 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 23921 bytes
Input file size = 24023 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18798
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18798
Output IDAT size = 18798 bytes (5123 bytes decrease)
Output file size = 18876 bytes (5147 bytes = 21.43% decrease)
Quitting from lines 164-165 [unnamed-chunk-8] (survival.Rmd)
Error: processing vignette 'survival.Rmd' failed with diagnostics:
The package "broom.helpers" (>= 1.15.0) is required.
--- failed re-building ‘survival.Rmd’
--- re-building ‘treat_and_exposure.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/treat_and_exposure_files/figure-html/unnamed-chunk-6-1.png
384x576 pixels, 8 bits/pixel, 245 colors in palette
Input IDAT size = 9779 bytes
Input file size = 10616 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8767
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8767
Output IDAT size = 8767 bytes (1012 bytes decrease)
Output file size = 9592 bytes (1024 bytes = 9.65% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/treat_and_exposure_files/figure-html/unnamed-chunk-10-1.png
624x240 pixels, 8 bits/pixel, 250 colors in palette
Input IDAT size = 4681 bytes
Input file size = 5521 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4254
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4231
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4231
Output IDAT size = 4231 bytes (450 bytes decrease)
Output file size = 5071 bytes (450 bytes = 8.15% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/treat_and_exposure_files/figure-html/unnamed-chunk-12-1.png
624x240 pixels, 8 bits/pixel, 250 colors in palette
Input IDAT size = 4719 bytes
Input file size = 5559 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4251
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4237
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4237
Output IDAT size = 4237 bytes (482 bytes decrease)
Output file size = 5077 bytes (482 bytes = 8.67% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/simstudy.Rcheck/vign_test/simstudy/vignettes/treat_and_exposure_files/figure-html/unnamed-chunk-15-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29347 bytes
Input file size = 29461 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22407
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22407
Output IDAT size = 22407 bytes (6940 bytes decrease)
Output file size = 22485 bytes (6976 bytes = 23.68% decrease)
--- finished re-building ‘treat_and_exposure.Rmd’
SUMMARY: processing the following file failed:
‘survival.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang