Last updated on 2020-06-02 06:48:53 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.9-3 | 206.64 | 156.03 | 362.67 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.9-3 | 162.08 | 178.74 | 340.82 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.9-3 | 609.93 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.9-3 | 534.71 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 0.9-3 | 558.00 | 731.00 | 1289.00 | NOTE | |
| r-patched-linux-x86_64 | 0.9-3 | 172.01 | 233.75 | 405.76 | ERROR | |
| r-patched-solaris-x86 | 0.9-3 | 547.90 | ERROR | |||
| r-release-linux-x86_64 | 0.9-3 | 161.55 | 161.04 | 322.59 | ERROR | |
| r-release-osx-x86_64 | 0.9-3 | NOTE | ||||
| r-release-windows-ix86+x86_64 | 0.9-3 | 421.00 | 643.00 | 1064.00 | ERROR | |
| r-oldrel-osx-x86_64 | 0.9-3 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 0.9-3 | 439.00 | 813.00 | 1252.00 | NOTE |
Version: 0.9-3
Check: examples
Result: ERROR
Running examples in 'sf-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bind
> ### Title: Bind rows (features) of sf objects
> ### Aliases: bind rbind.sf cbind.sf st_bind_cols
>
> ### ** Examples
>
> crs = st_crs(3857)
> a = st_sf(a=1, geom = st_sfc(st_point(0:1)), crs = crs)
> b = st_sf(a=1, geom = st_sfc(st_linestring(matrix(1:4,2))), crs = crs)
> c = st_sf(a=4, geom = st_sfc(st_multilinestring(list(matrix(1:4,2)))), crs = crs)
> rbind(a,b,c)
Simple feature collection with 3 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
3 4 MULTILINESTRING ((1 3, 2 4))
> rbind(a,b)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
> rbind(a,b)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
> rbind(b,c)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 1 ymin: 3 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 LINESTRING (1 3, 2 4)
2 4 MULTILINESTRING ((1 3, 2 4))
> cbind(a,b,c) # warns
Simple feature collection with 1 feature and 3 fields
Active geometry column: geom
geometry type: POINT
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 0 ymax: 1
projected CRS: WGS 84 / Pseudo-Mercator
a a.1 a.2 geom geom.1 geom.2
1 1 1 4 POINT (0 1) LINESTRING (1 3, 2 4) MULTILINESTRING ((1 3, 2 4))
> if (require(dplyr))
+ dplyr::bind_cols(a,b)
Loading required package: dplyr
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
New names:
* a -> a...1
* geom -> geom...2
* a -> a...3
* geom -> geom...4
Error in st_geometry.sf(x) :
attr(obj, "sf_column") does not point to a geometry column.
Did you rename it, without setting st_geometry(obj) <- "newname"?
Calls: <Anonymous> -> print.sf -> print -> st_geometry -> st_geometry.sf
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.9-3
Check: tests
Result: ERROR
Running 'aggregate.R' [1s/1s]
Comparing 'aggregate.Rout' to 'aggregate.Rout.save' ...4c4
< Linking to GEOS 3.8.1, GDAL 3.0.4, PROJ 7.0.1
---
> Linking to GEOS 3.8.0, GDAL 3.0.2, PROJ 6.2.1
Running 'cast.R' [1s/1s]
Comparing 'cast.Rout' to 'cast.Rout.save' ... OK
Running 'crs.R' [1s/1s]
Comparing 'crs.Rout' to 'crs.Rout.save' ...70,72d69
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running 'dist.R' [1s/1s]
Comparing 'dist.Rout' to 'dist.Rout.save' ... OK
Running 'dplyr.R' [5s/6s]
Comparing 'dplyr.Rout' to 'dplyr.Rout.save' ...69d68
< `summarise()` ungrouping output (override with `.groups` argument)
78,81c77,80
< 1 (0,0.1] 0.0760 (((-8678517 4054264, -8679088 4061405, -8680136 40615~
< 2 (0.1,0.12] 0.112 (((-9383227 4192541, -9375980 4199500, -9370835 41966~
< 3 (0.12,0.1~ 0.134 (((-8520830 4108031, -8522040 4111119, -8520104 41115~
< 4 (0.15,0.2~ 0.190 (((-8685774 4073056, -8684147 4070879, -8683670 40671~
---
> 1 (0,0.1] 0.0760 (((-8678517 4054264, -8679088 4061405, -8680136 40615â<c2><80>Š
> 2 (0.1,0.12] 0.112 (((-9383227 4192541, -9375980 4199500, -9370835 41966â<c2><80>Š
> 3 (0.12,0.1â<c2><80>Š 0.134 (((-8520830 4108031, -8522040 4111119, -8520104 41115â<c2><80>Š
> 4 (0.15,0.2â<c2><80>Š 0.190 (((-8685774 4073056, -8684147 4070879, -8683670 40671â<c2><80>Š
83d81
< `summarise()` ungrouping output (override with `.groups` argument)
111,116c109,114
< 1 95 (((-8588146 4131923, -8589850 4133303, -8589356 4135198, -8~ SID79 4
< 2 96 (((-8711999 4081959, -8719511 4077863, -8731642 4078864, -8~ SID79 5
< 3 97 (((-8685774 4073056, -8697387 4077823, -8700120 4077570, -8~ SID79 3
< 4 98 (((-8755885 4021935, -8802506 4069795, -8798771 4071779, -8~ SID79 17
< 5 99 (((-8678517 4054264, -8679088 4061405, -8680136 4061550, -8~ SID79 9
< 6 100 (((-8755885 4021935, -8753548 4025868, -8753052 4030195, -8~ SID79 6
---
> 1 95 (((-8588146 4131923, -8589850 4133303, -8589356 4135198, -8â<c2><80>Š SID79 4
> 2 96 (((-8711999 4081959, -8719511 4077863, -8731642 4078864, -8â<c2><80>Š SID79 5
> 3 97 (((-8685774 4073056, -8697387 4077823, -8700120 4077570, -8â<c2><80>Š SID79 3
> 4 98 (((-8755885 4021935, -8802506 4069795, -8798771 4071779, -8â<c2><80>Š SID79 17
> 5 99 (((-8678517 4054264, -8679088 4061405, -8680136 4061550, -8â<c2><80>Š SID79 9
> 6 100 (((-8755885 4021935, -8753548 4025868, -8753052 4030195, -8â<c2><80>Š SID79 6
126,131c124,129
< 1 1 (((-9069486 4332934, -9077066 4338201, -9079419 4338351, -9~ 1 0
< 2 2 (((-9043562 4351030, -9043652 4352973, -9046117 4356516, -9~ 0 3
< 3 3 (((-8956335 4334068, -8958566 4335747, -8965300 4336025, -8~ 5 6
< 4 4 (((-8461241 4344709, -8462173 4347214, -8463902 4346972, -8~ 1 2
< 5 5 (((-8595797 4333852, -8597683 4330212, -8604808 4329788, -8~ 9 3
< 6 6 (((-8543185 4332878, -8569416 4332369, -8570981 4333107, -8~ 7 5
---
> 1 1 (((-9069486 4332934, -9077066 4338201, -9079419 4338351, -9â<c2><80>Š 1 0
> 2 2 (((-9043562 4351030, -9043652 4352973, -9046117 4356516, -9â<c2><80>Š 0 3
> 3 3 (((-8956335 4334068, -8958566 4335747, -8965300 4336025, -8â<c2><80>Š 5 6
> 4 4 (((-8461241 4344709, -8462173 4347214, -8463902 4346972, -8â<c2><80>Š 1 2
> 5 5 (((-8595797 4333852, -8597683 4330212, -8604808 4329788, -8â<c2><80>Š 9 3
> 6 6 (((-8543185 4332878, -8569416 4332369, -8570981 4333107, -8â<c2><80>Š 7 5
141,146c139,144
< 1 (((-9069486 4332934, -9077066 4338201, -9079419 4338351, -9~ 1 1 0
< 2 (((-9043562 4351030, -9043652 4352973, -9046117 4356516, -9~ 2 0 3
< 3 (((-8956335 4334068, -8958566 4335747, -8965300 4336025, -8~ 3 5 6
< 4 (((-8461241 4344709, -8462173 4347214, -8463902 4346972, -8~ 4 1 2
< 5 (((-8595797 4333852, -8597683 4330212, -8604808 4329788, -8~ 5 9 3
< 6 (((-8543185 4332878, -8569416 4332369, -8570981 4333107, -8~ 6 7 5
---
> 1 (((-9069486 4332934, -9077066 4338201, -9079419 4338351, -9â<c2><80>Š 1 1 0
> 2 (((-9043562 4351030, -9043652 4352973, -9046117 4356516, -9â<c2><80>Š 2 0 3
> 3 (((-8956335 4334068, -8958566 4335747, -8965300 4336025, -8â<c2><80>Š 3 5 6
> 4 (((-8461241 4344709, -8462173 4347214, -8463902 4346972, -8â<c2><80>Š 4 1 2
> 5 (((-8595797 4333852, -8597683 4330212, -8604808 4329788, -8â<c2><80>Š 5 9 3
> 6 (((-8543185 4332878, -8569416 4332369, -8570981 4333107, -8â<c2><80>Š 6 7 5
174d171
< `summarise()` ungrouping output (override with `.groups` argument)
186c183
< 1 2.593234e-06 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88, 6485~
---
> 1 2.593234e-06 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88, 6485â<c2><80>Š
196c193
< 1 2.589362e-06 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, 70~
---
> 1 2.589362e-06 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, 70â<c2><80>Š
208c205
< 1 329962 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88~
---
> 1 329962 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88â<c2><80>Š
216c213
< `sum(A * new_dens~ geometry
---
> `sum(A * new_densâ<c2><80>Š geometry
218c215
< 1 329962 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, ~
---
> 1 329962 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, â<c2><80>Š
268,272d264
< Warning message:
< The `keep` argument of `group_split()` is deprecated as of dplyr 1.0.0.
< Please use the `.keep` argument instead.
< This warning is displayed once every 8 hours.
< Call `lifecycle::last_warnings()` to see where this warning was generated.
Running 'empty.R' [1s/1s]
Comparing 'empty.Rout' to 'empty.Rout.save' ... OK
Running 'gdal_geom.R' [1s/1s]
Comparing 'gdal_geom.Rout' to 'gdal_geom.Rout.save' ...278c278
< Error : cannot convert km into arc_degree
---
> Error : cannot convert km into °
Running 'geos.R' [7s/7s]
Comparing 'geos.Rout' to 'geos.Rout.save' ... OK
Running 'graticule.R' [2s/2s]
Comparing 'graticule.Rout' to 'graticule.Rout.save' ... OK
Running 'grid.R' [1s/1s]
Comparing 'grid.Rout' to 'grid.Rout.save' ... OK
Running 'maps.R' [2s/2s]
Comparing 'maps.Rout' to 'maps.Rout.save' ... OK
Running 'plot.R' [6s/6s]
Comparing 'plot.Rout' to 'plot.Rout.save' ...25,27d24
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running 'read.R' [2s/4s]
Comparing 'read.Rout' to 'read.Rout.save' ...330c330
< Reading layer `tst__' from data source `/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
---
> Reading layer `tst__' from data source `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
351a352,358
> > proc.time()
> user system elapsed
> <<<<<<< HEAD
> 1.502 0.090 1.590
> =======
> 1.166 0.068 1.230
> >>>>>>> gdal3
Running 'roundtrip.R' [6s/7s]
Comparing 'roundtrip.Rout' to 'roundtrip.Rout.save' ...48,50d47
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
52,54d48
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
57,60c51,52
< Warning messages:
< 1: In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
< 2: In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
---
> Warning message:
> In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
63,65d54
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
67,69d55
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
71,73d56
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
114a98,100
> Warning message:
> In CPL_crs_from_input(x) :
> GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order.
162c148
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running 'sample.R' [1s/1s]
Comparing 'sample.Rout' to 'sample.Rout.save' ... OK
Running 'sfc.R' [8s/10s]
Comparing 'sfc.Rout' to 'sfc.Rout.save' ...335c335
< "3.8.1" "3.0.4" "7.0.1"
---
> "3.8.0" "3.0.4" "7.0.0"
568,570c568,570
< 1 1 5 b POINT (0 0)
< 2 2 6 c POINT (1 1)
< 3 NA 2 a POINT EMPTY
---
> 1 NA 2 a POINT EMPTY
> 2 1 5 b POINT (0 0)
> 3 2 6 c POINT (1 1)
641c641
< Reading layer `nc' from data source `/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sf/shape/nc.shp' using driver `ESRI Shapefile'
---
> Reading layer `nc' from data source `/home/edzer/git/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
815,821d814
< New names:
< * AREA -> AREA...1
< * PERIMETER -> PERIMETER...2
< * CNTY_ -> CNTY_...3
< * AREA -> AREA...16
< * PERIMETER -> PERIMETER...17
< * ...
858,860d850
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
Running 'sfg.R' [1s/49s]
Comparing 'sfg.Rout' to 'sfg.Rout.save' ... OK
Running 'spatstat.R' [5s/13s]
Comparing 'spatstat.Rout' to 'spatstat.Rout.save' ...198c198
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running 'stars.R' [3s/4s]
Comparing 'stars.Rout' to 'stars.Rout.save' ...125c125
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running 'testthat.R' [11s/14s]
Running 'units.R' [1s/1s]
Comparing 'units.Rout' to 'units.Rout.save' ... OK
Running 'wkb.R' [1s/1s]
Comparing 'wkb.Rout' to 'wkb.Rout.save' ... OK
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> suppressPackageStartupMessages(library(sf))
>
> test_check("sf")
proj_create: Cannot find proj.db
proj_create: Cannot find proj.db
proj_create_operation_factory_context: Cannot find proj.db
pj_obj_create: Cannot find proj.db
pj_obj_create: Cannot find proj.db
Cannot open layer foo
Reading layer `nospatial' from data source `/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sf/gpkg/nospatial.gpkg' using driver `GPKG'
Reading layer `nospatial' from data source `/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/sf/gpkg/nospatial.gpkg' using driver `GPKG'
OGR: Unsupported geometry type
-- 1. Failure: filter to sfc works (@test_tidy.R#17) --------------------------
d %>% filter(!st_is_empty(geometry)) not identical to d[1, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
-- 2. Failure: filter to sfc works (@test_tidy.R#19) --------------------------
d %>% filter(st_is(geometry, "POINT")) not identical to d[1:2, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
Failed to create feature 1 in x
Failed to create feature 1 in x
== testthat results ===========================================================
[ OK: 697 | SKIPPED: 59 | WARNINGS: 8 | FAILED: 2 ]
1. Failure: filter to sfc works (@test_tidy.R#17)
2. Failure: filter to sfc works (@test_tidy.R#19)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.9-3
Check: tests
Result: ERROR
Running ‘aggregate.R’ [1s/2s]
Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ...4c4
< Linking to GEOS 3.8.1, GDAL 3.0.4, PROJ 7.0.1
---
> Linking to GEOS 3.8.0, GDAL 3.0.2, PROJ 6.2.1
Running ‘cast.R’ [1s/2s]
Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK
Running ‘crs.R’ [1s/2s]
Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ...70,72d69
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running ‘dist.R’ [1s/2s]
Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ... OK
Running ‘dplyr.R’ [7s/10s]
Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ...69d68
< `summarise()` ungrouping output (override with `.groups` argument)
83d81
< `summarise()` ungrouping output (override with `.groups` argument)
174d171
< `summarise()` ungrouping output (override with `.groups` argument)
268,272d264
< Warning message:
< The `keep` argument of `group_split()` is deprecated as of dplyr 1.0.0.
< Please use the `.keep` argument instead.
< This warning is displayed once every 8 hours.
< Call `lifecycle::last_warnings()` to see where this warning was generated.
Running ‘empty.R’ [1s/2s]
Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK
Running ‘gdal_geom.R’ [2s/2s]
Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ... OK
Running ‘geos.R’ [9s/11s]
Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ... OK
Running ‘graticule.R’ [3s/4s]
Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK
Running ‘grid.R’ [2s/3s]
Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK
Running ‘maps.R’ [3s/4s]
Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ... OK
Running ‘plot.R’ [8s/13s]
Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ...25,27d24
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running ‘read.R’ [3s/4s]
Comparing ‘read.Rout’ to ‘read.Rout.save’ ...330c330
< Reading layer `tst__' from data source `/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
---
> Reading layer `tst__' from data source `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
351a352,358
> > proc.time()
> user system elapsed
> <<<<<<< HEAD
> 1.502 0.090 1.590
> =======
> 1.166 0.068 1.230
> >>>>>>> gdal3
Running ‘roundtrip.R’ [8s/11s]
Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ...48,50d47
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
52,54d48
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
57,60c51,52
< Warning messages:
< 1: In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
< 2: In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
---
> Warning message:
> In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
63,65d54
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
67,69d55
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
71,73d56
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
114a98,100
> Warning message:
> In CPL_crs_from_input(x) :
> GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order.
162c148
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running ‘sample.R’ [1s/2s]
Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK
Running ‘sfc.R’ [9s/12s]
Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ...335c335
< "3.8.1" "3.0.4" "7.0.1"
---
> "3.8.0" "3.0.4" "7.0.0"
568,570c568,570
< 1 1 5 b POINT (0 0)
< 2 2 6 c POINT (1 1)
< 3 NA 2 a POINT EMPTY
---
> 1 NA 2 a POINT EMPTY
> 2 1 5 b POINT (0 0)
> 3 2 6 c POINT (1 1)
641c641
< Reading layer `nc' from data source `/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/sf/shape/nc.shp' using driver `ESRI Shapefile'
---
> Reading layer `nc' from data source `/home/edzer/git/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
815,821d814
< New names:
< * AREA -> AREA...1
< * PERIMETER -> PERIMETER...2
< * CNTY_ -> CNTY_...3
< * AREA -> AREA...16
< * PERIMETER -> PERIMETER...17
< * ...
858,860d850
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
Running ‘sfg.R’ [1s/2s]
Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK
Running ‘spatstat.R’ [4s/5s]
Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ...198c198
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running ‘stars.R’ [2s/4s]
Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...125c125
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running ‘testthat.R’ [9s/14s]
Running ‘units.R’ [1s/3s]
Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK
Running ‘wkb.R’ [1s/2s]
Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> suppressPackageStartupMessages(library(sf))
>
> test_check("sf")
proj_create: Cannot find proj.db
proj_create: Cannot find proj.db
proj_create_operation_factory_context: Cannot find proj.db
pj_obj_create: Cannot find proj.db
pj_obj_create: Cannot find proj.db
Cannot open layer foo
Reading layer `nospatial' from data source `/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/sf/gpkg/nospatial.gpkg' using driver `GPKG'
Reading layer `nospatial' from data source `/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/sf/gpkg/nospatial.gpkg' using driver `GPKG'
OGR: Unsupported geometry type
── 1. Failure: filter to sfc works (@test_tidy.R#17) ──────────────────────────
d %>% filter(!st_is_empty(geometry)) not identical to d[1, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
── 2. Failure: filter to sfc works (@test_tidy.R#19) ──────────────────────────
d %>% filter(st_is(geometry, "POINT")) not identical to d[1:2, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
Failed to create feature 1 in x
Failed to create feature 1 in x
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 697 | SKIPPED: 59 | WARNINGS: 8 | FAILED: 2 ]
1. Failure: filter to sfc works (@test_tidy.R#17)
2. Failure: filter to sfc works (@test_tidy.R#19)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.9-3
Check: installed package size
Result: NOTE
installed size is 26.6Mb
sub-directories of 1Mb or more:
doc 11.9Mb
libs 10.2Mb
sqlite 1.5Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-osx-x86_64, r-release-windows-ix86+x86_64, r-oldrel-osx-x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.9-3
Check: examples
Result: ERROR
Running examples in ‘sf-Ex.R’ failed
The error most likely occurred in:
> ### Name: bind
> ### Title: Bind rows (features) of sf objects
> ### Aliases: bind rbind.sf cbind.sf st_bind_cols
>
> ### ** Examples
>
> crs = st_crs(3857)
> a = st_sf(a=1, geom = st_sfc(st_point(0:1)), crs = crs)
> b = st_sf(a=1, geom = st_sfc(st_linestring(matrix(1:4,2))), crs = crs)
> c = st_sf(a=4, geom = st_sfc(st_multilinestring(list(matrix(1:4,2)))), crs = crs)
> rbind(a,b,c)
Simple feature collection with 3 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
CRS: EPSG:3857
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
3 4 MULTILINESTRING ((1 3, 2 4))
> rbind(a,b)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
CRS: EPSG:3857
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
> rbind(a,b)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
CRS: EPSG:3857
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
> rbind(b,c)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 1 ymin: 3 xmax: 2 ymax: 4
CRS: EPSG:3857
a geom
1 1 LINESTRING (1 3, 2 4)
2 4 MULTILINESTRING ((1 3, 2 4))
> cbind(a,b,c) # warns
Simple feature collection with 1 feature and 3 fields
Active geometry column: geom
geometry type: POINT
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 0 ymax: 1
CRS: EPSG:3857
a a.1 a.2 geom geom.1 geom.2
1 1 1 4 POINT (0 1) LINESTRING (1 3, 2 4) MULTILINESTRING ((1 3, 2 4))
> if (require(dplyr))
+ dplyr::bind_cols(a,b)
Loading required package: dplyr
Attaching package: ‘dplyr’
The following objects are masked from ‘package:stats’:
filter, lag
The following objects are masked from ‘package:base’:
intersect, setdiff, setequal, union
New names:
* a -> a...1
* geom -> geom...2
* a -> a...3
* geom -> geom...4
Error in st_geometry.sf(x) :
attr(obj, "sf_column") does not point to a geometry column.
Did you rename it, without setting st_geometry(obj) <- "newname"?
Calls: <Anonymous> -> print.sf -> print -> st_geometry -> st_geometry.sf
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86
Version: 0.9-3
Check: tests
Result: ERROR
Running ‘aggregate.R’
Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ...4c4
< Linking to GEOS 3.7.1, GDAL 2.3.2, PROJ 5.2.0
---
> Linking to GEOS 3.8.0, GDAL 3.0.2, PROJ 6.2.1
Running ‘cast.R’
Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK
Running ‘crs.R’
Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ...54c54
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
Running ‘dist.R’
Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ...54c54
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
Running ‘dplyr.R’ [10s/21s]
Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ...69d68
< `summarise()` ungrouping output (override with `.groups` argument)
74c73
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
81c80
< 4 (0.15,0.2… 0.190 (((-8532272 4151181, -8529886 4149052, -8543756 41433…
---
> 4 (0.15,0.2… 0.190 (((-8685774 4073056, -8684147 4070879, -8683670 40671…
83d81
< `summarise()` ungrouping output (override with `.groups` argument)
107c105
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
122c120
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
137c135
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
156c154
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
174d171
< `summarise()` ungrouping output (override with `.groups` argument)
182c179
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
186c183
< 1 2.593234e-06 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72, 84006…
---
> 1 2.593234e-06 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88, 6485…
192c189
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
196c193
< 1 2.589362e-06 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72, 8…
---
> 1 2.589362e-06 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, 70…
204c201
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
208c205
< 1 329962 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72,…
---
> 1 329962 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88…
214c211
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
218c215
< 1 329962 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72,…
---
> 1 329962 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, …
268,272d264
< Warning message:
< The `keep` argument of `group_split()` is deprecated as of dplyr 1.0.0.
< Please use the `.keep` argument instead.
< This warning is displayed once every 8 hours.
< Call `lifecycle::last_warnings()` to see where this warning was generated.
Running ‘empty.R’
Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK
Running ‘gdal_geom.R’
Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ...245c245
< [1,] 1760244757 0.114
---
> [1,] 1760244967 0.114
Running ‘geos.R’ [14s/34s]
Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ...85c85
< CRS: 4267
---
> geographic CRS: NAD27
Running ‘graticule.R’ [5s/12s]
Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK
Running ‘grid.R’
Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK
Running ‘maps.R’
Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ...12c12
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
26c26
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
39c39
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
57c57
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
75c75
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
93c93
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
Running ‘plot.R’ [13s/40s]
Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ... OK
Running ‘read.R’ [4s/13s]
Comparing ‘read.Rout’ to ‘read.Rout.save’ ...68c68
< CRS: 4326
---
> geographic CRS: WGS 84
93c93
< CRS: 4267
---
> geographic CRS: NAD27
268c268
< CRS: EPSG:32632
---
> projected CRS: WGS 84 / UTM zone 32N
278c278
< CRS: EPSG:32632
---
> projected CRS: WGS 84 / UTM zone 32N
292c292
< CRS: EPSG:32632
---
> projected CRS: WGS 84 / UTM zone 32N
330c330
< Reading layer `tst__' from data source `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
---
> Reading layer `tst__' from data source `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
335c335
< CRS: 4267
---
> geographic CRS: NAD27
351a352,358
> > proc.time()
> user system elapsed
> <<<<<<< HEAD
> 1.502 0.090 1.590
> =======
> 1.166 0.068 1.230
> >>>>>>> gdal3
Running ‘roundtrip.R’ [10s/34s]
Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ...97a98,100
> Warning message:
> In CPL_crs_from_input(x) :
> GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order.
145c148
< Reading layer `nc.gpkg' from data source `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
150c153
< CRS: 4267
---
> geographic CRS: NAD27
154d156
< [3] "Component 15: Attributes: < Component \"crs\": Component \"input\": 1 string mismatch >"
Running ‘sample.R’
Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK
Running ‘sfc.R’ [14s/49s]
Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ...161c161
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
335c335
< "3.7.1" "2.3.2" "5.2.0"
---
> "3.8.0" "3.0.4" "7.0.0"
469c469
< User input: 4267
---
> User input: NAD27
471,475c471,474
< GEOGCS["NAD27",
< DATUM["North_American_Datum_1927",
< SPHEROID["Clarke 1866",6378206.4,294.9786982138982,
< AUTHORITY["EPSG","7008"]],
< AUTHORITY["EPSG","6267"]],
---
> GEOGCRS["NAD27",
> DATUM["North American Datum 1927",
> ELLIPSOID["Clarke 1866",6378206.4,294.978698213898,
> LENGTHUNIT["metre",1]]],
477,480c476,484
< AUTHORITY["EPSG","8901"]],
< UNIT["degree",0.0174532925199433,
< AUTHORITY["EPSG","9122"]],
< AUTHORITY["EPSG","4267"]]
---
> ANGLEUNIT["degree",0.0174532925199433]],
> CS[ellipsoidal,2],
> AXIS["latitude",north,
> ORDER[1],
> ANGLEUNIT["degree",0.0174532925199433]],
> AXIS["longitude",east,
> ORDER[2],
> ANGLEUNIT["degree",0.0174532925199433]],
> ID["EPSG",4267]]
564,566c568,570
< 1 1 5 b POINT (0 0)
< 2 2 6 c POINT (1 1)
< 3 NA 2 a POINT EMPTY
---
> 1 NA 2 a POINT EMPTY
> 2 1 5 b POINT (0 0)
> 3 2 6 c POINT (1 1)
637c641
< Reading layer `nc' from data source `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
---
> Reading layer `nc' from data source `/home/edzer/git/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
642c646
< CRS: 4267
---
> geographic CRS: NAD27
654c658
< CRS: EPSG:2264
---
> projected CRS: NAD83 / North Carolina (ftUS)
688c692
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
714c718
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
735c739
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
771c775
< CRS: EPSG:2264
---
> projected CRS: NAD83 / North Carolina (ftUS)
786c790
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
811,817d814
< New names:
< * AREA -> AREA...1
< * PERIMETER -> PERIMETER...2
< * CNTY_ -> CNTY_...3
< * AREA -> AREA...16
< * PERIMETER -> PERIMETER...17
< * ...
949c946
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
957c954
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
972c969
< CRS: 4326
---
> geographic CRS: WGS 84
983c980
< CRS: 4326
---
> geographic CRS: WGS 84
995c992
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
1008c1005
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
Running ‘sfg.R’
Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK
Running ‘spatstat.R’ [6s/15s]
Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ...198c198
< Reading layer `nc.gpkg' from data source `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
203c203
< CRS: 4267
---
> geographic CRS: NAD27
Running ‘stars.R’ [4s/13s]
Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...107c107
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
118c118
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
125c125
< Reading layer `nc.gpkg' from data source `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
131c131
< CRS: 4267
---
> geographic CRS: NAD27
144,145c144,145
< x 1 461 -84.3239 0.0192484 GEOGCS["NAD27",DATUM["Nor... FALSE NULL [x]
< y 1 141 36.5896 -0.0192484 GEOGCS["NAD27",DATUM["Nor... FALSE NULL [y]
---
> x 1 461 -84.3239 0.0192484 NAD27 FALSE NULL [x]
> y 1 141 36.5896 -0.0192484 NAD27 FALSE NULL [y]
150c150
< CRS: GEOGCS["NAD27",DATUM["North_American_Datum_1927",SPHEROID["Clarke 1866",6378206.4,294.9786982138982,AUTHORITY["EPSG","7008"]],AUTHORITY["EPSG","6267"]],PRIMEM["Greenwich",0],UNIT["degree",0.0174532925199433],AUTHORITY["EPSG","4267"]]
---
> geographic CRS: NAD27
167c167
< CRS: GEOGCS["NAD27",DATUM["North_American_Datum_1927",SPHEROID["Clarke 1866",6378206.4,294.9786982138982,AUTHORITY["EPSG","7008"]],AUTHORITY["EPSG","6267"]],PRIMEM["Greenwich",0],UNIT["degree",0.0174532925199433],AUTHORITY["EPSG","4267"]]
---
> geographic CRS: NAD27
184c184
< CRS: GEOGCS["NAD27",DATUM["North_American_Datum_1927",SPHEROID["Clarke 1866",6378206.4,294.9786982138982,AUTHORITY["EPSG","7008"]],AUTHORITY["EPSG","6267"]],PRIMEM["Greenwich",0],UNIT["degree",0.0174532925199433],AUTHORITY["EPSG","4267"]]
---
> geographic CRS: NAD27
Running ‘testthat.R’ [14s/40s]
Running ‘units.R’
Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK
Running ‘wkb.R’
Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> suppressPackageStartupMessages(library(sf))
>
> test_check("sf")
Cannot open layer foo
Reading layer `nospatial' from data source `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/sf/gpkg/nospatial.gpkg' using driver `GPKG'
Reading layer `nospatial' from data source `/data/gannet/ripley/R/packages/tests-clang/sf.Rcheck/sf/gpkg/nospatial.gpkg' using driver `GPKG'
OGR: Unsupported geometry type
── 1. Failure: filter to sfc works (@test_tidy.R#17) ──────────────────────────
d %>% filter(!st_is_empty(geometry)) not identical to d[1, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
── 2. Failure: filter to sfc works (@test_tidy.R#19) ──────────────────────────
d %>% filter(st_is(geometry, "POINT")) not identical to d[1:2, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
Failed to create feature 1 in x
Failed to create feature 1 in x
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 704 | SKIPPED: 55 | WARNINGS: 6 | FAILED: 2 ]
1. Failure: filter to sfc works (@test_tidy.R#17)
2. Failure: filter to sfc works (@test_tidy.R#19)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.9-3
Check: tests
Result: ERROR
Running ‘aggregate.R’
Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ...4c4
< Linking to GEOS 3.7.1, GDAL 2.3.2, PROJ 5.2.0
---
> Linking to GEOS 3.8.0, GDAL 3.0.2, PROJ 6.2.1
Running ‘cast.R’
Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK
Running ‘crs.R’
Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ...54c54
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
Running ‘dist.R’
Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ...54c54
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
Running ‘dplyr.R’ [10s/12s]
Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ...69d68
< `summarise()` ungrouping output (override with `.groups` argument)
74c73
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
81c80
< 4 (0.15,0.2… 0.190 (((-8532272 4151181, -8529886 4149052, -8543756 41433…
---
> 4 (0.15,0.2… 0.190 (((-8685774 4073056, -8684147 4070879, -8683670 40671…
83d81
< `summarise()` ungrouping output (override with `.groups` argument)
107c105
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
122c120
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
137c135
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
156c154
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
174d171
< `summarise()` ungrouping output (override with `.groups` argument)
182c179
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
186c183
< 1 2.593234e-06 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72, 84006…
---
> 1 2.593234e-06 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88, 6485…
192c189
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
196c193
< 1 2.589362e-06 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72, 8…
---
> 1 2.589362e-06 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, 70…
204c201
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
208c205
< 1 329962 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72,…
---
> 1 329962 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88…
214c211
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
218c215
< 1 329962 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72,…
---
> 1 329962 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, …
268,272d264
< Warning message:
< The `keep` argument of `group_split()` is deprecated as of dplyr 1.0.0.
< Please use the `.keep` argument instead.
< This warning is displayed once every 8 hours.
< Call `lifecycle::last_warnings()` to see where this warning was generated.
Running ‘empty.R’
Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK
Running ‘gdal_geom.R’
Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ...245c245
< [1,] 1760244757 0.114
---
> [1,] 1760244967 0.114
Running ‘geos.R’ [14s/19s]
Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ...85c85
< CRS: 4267
---
> geographic CRS: NAD27
Running ‘graticule.R’
Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK
Running ‘grid.R’
Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK
Running ‘maps.R’
Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ...12c12
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
26c26
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
39c39
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
57c57
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
75c75
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
93c93
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
Running ‘plot.R’ [13s/17s]
Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ... OK
Running ‘read.R’
Comparing ‘read.Rout’ to ‘read.Rout.save’ ...68c68
< CRS: 4326
---
> geographic CRS: WGS 84
93c93
< CRS: 4267
---
> geographic CRS: NAD27
268c268
< CRS: EPSG:32632
---
> projected CRS: WGS 84 / UTM zone 32N
278c278
< CRS: EPSG:32632
---
> projected CRS: WGS 84 / UTM zone 32N
292c292
< CRS: EPSG:32632
---
> projected CRS: WGS 84 / UTM zone 32N
330c330
< Reading layer `tst__' from data source `/data/gannet/ripley/R/packages/tests-devel/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
---
> Reading layer `tst__' from data source `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
335c335
< CRS: 4267
---
> geographic CRS: NAD27
351a352,358
> > proc.time()
> user system elapsed
> <<<<<<< HEAD
> 1.502 0.090 1.590
> =======
> 1.166 0.068 1.230
> >>>>>>> gdal3
Running ‘roundtrip.R’ [10s/12s]
Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ...97a98,100
> Warning message:
> In CPL_crs_from_input(x) :
> GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order.
145c148
< Reading layer `nc.gpkg' from data source `/data/gannet/ripley/R/packages/tests-devel/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
150c153
< CRS: 4267
---
> geographic CRS: NAD27
154d156
< [3] "Component 15: Attributes: < Component \"crs\": Component \"input\": 1 string mismatch >"
Running ‘sample.R’
Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK
Running ‘sfc.R’ [13s/18s]
Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ...161c161
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
335c335
< "3.7.1" "2.3.2" "5.2.0"
---
> "3.8.0" "3.0.4" "7.0.0"
469c469
< User input: 4267
---
> User input: NAD27
471,475c471,474
< GEOGCS["NAD27",
< DATUM["North_American_Datum_1927",
< SPHEROID["Clarke 1866",6378206.4,294.9786982138982,
< AUTHORITY["EPSG","7008"]],
< AUTHORITY["EPSG","6267"]],
---
> GEOGCRS["NAD27",
> DATUM["North American Datum 1927",
> ELLIPSOID["Clarke 1866",6378206.4,294.978698213898,
> LENGTHUNIT["metre",1]]],
477,480c476,484
< AUTHORITY["EPSG","8901"]],
< UNIT["degree",0.0174532925199433,
< AUTHORITY["EPSG","9122"]],
< AUTHORITY["EPSG","4267"]]
---
> ANGLEUNIT["degree",0.0174532925199433]],
> CS[ellipsoidal,2],
> AXIS["latitude",north,
> ORDER[1],
> ANGLEUNIT["degree",0.0174532925199433]],
> AXIS["longitude",east,
> ORDER[2],
> ANGLEUNIT["degree",0.0174532925199433]],
> ID["EPSG",4267]]
564,566c568,570
< 1 1 5 b POINT (0 0)
< 2 2 6 c POINT (1 1)
< 3 NA 2 a POINT EMPTY
---
> 1 NA 2 a POINT EMPTY
> 2 1 5 b POINT (0 0)
> 3 2 6 c POINT (1 1)
637c641
< Reading layer `nc' from data source `/data/gannet/ripley/R/packages/tests-devel/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
---
> Reading layer `nc' from data source `/home/edzer/git/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
642c646
< CRS: 4267
---
> geographic CRS: NAD27
654c658
< CRS: EPSG:2264
---
> projected CRS: NAD83 / North Carolina (ftUS)
688c692
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
714c718
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
735c739
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
771c775
< CRS: EPSG:2264
---
> projected CRS: NAD83 / North Carolina (ftUS)
786c790
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
811,817d814
< New names:
< * AREA -> AREA...1
< * PERIMETER -> PERIMETER...2
< * CNTY_ -> CNTY_...3
< * AREA -> AREA...16
< * PERIMETER -> PERIMETER...17
< * ...
949c946
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
957c954
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
972c969
< CRS: 4326
---
> geographic CRS: WGS 84
983c980
< CRS: 4326
---
> geographic CRS: WGS 84
995c992
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
1008c1005
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
Running ‘sfg.R’
Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK
Running ‘spatstat.R’
Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ...198c198
< Reading layer `nc.gpkg' from data source `/data/gannet/ripley/R/packages/tests-devel/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
203c203
< CRS: 4267
---
> geographic CRS: NAD27
Running ‘stars.R’
Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...107c107
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
118c118
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
125c125
< Reading layer `nc.gpkg' from data source `/data/gannet/ripley/R/packages/tests-devel/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
131c131
< CRS: 4267
---
> geographic CRS: NAD27
144,145c144,145
< x 1 461 -84.3239 0.0192484 GEOGCS["NAD27",DATUM["Nor... FALSE NULL [x]
< y 1 141 36.5896 -0.0192484 GEOGCS["NAD27",DATUM["Nor... FALSE NULL [y]
---
> x 1 461 -84.3239 0.0192484 NAD27 FALSE NULL [x]
> y 1 141 36.5896 -0.0192484 NAD27 FALSE NULL [y]
150c150
< CRS: GEOGCS["NAD27",DATUM["North_American_Datum_1927",SPHEROID["Clarke 1866",6378206.4,294.9786982138982,AUTHORITY["EPSG","7008"]],AUTHORITY["EPSG","6267"]],PRIMEM["Greenwich",0],UNIT["degree",0.0174532925199433],AUTHORITY["EPSG","4267"]]
---
> geographic CRS: NAD27
167c167
< CRS: GEOGCS["NAD27",DATUM["North_American_Datum_1927",SPHEROID["Clarke 1866",6378206.4,294.9786982138982,AUTHORITY["EPSG","7008"]],AUTHORITY["EPSG","6267"]],PRIMEM["Greenwich",0],UNIT["degree",0.0174532925199433],AUTHORITY["EPSG","4267"]]
---
> geographic CRS: NAD27
184c184
< CRS: GEOGCS["NAD27",DATUM["North_American_Datum_1927",SPHEROID["Clarke 1866",6378206.4,294.9786982138982,AUTHORITY["EPSG","7008"]],AUTHORITY["EPSG","6267"]],PRIMEM["Greenwich",0],UNIT["degree",0.0174532925199433],AUTHORITY["EPSG","4267"]]
---
> geographic CRS: NAD27
Running ‘testthat.R’ [13s/19s]
Running ‘units.R’
Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK
Running ‘wkb.R’
Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> suppressPackageStartupMessages(library(sf))
>
> test_check("sf")
Cannot open layer foo
Reading layer `nospatial' from data source `/data/gannet/ripley/R/packages/tests-devel/sf.Rcheck/sf/gpkg/nospatial.gpkg' using driver `GPKG'
Reading layer `nospatial' from data source `/data/gannet/ripley/R/packages/tests-devel/sf.Rcheck/sf/gpkg/nospatial.gpkg' using driver `GPKG'
OGR: Unsupported geometry type
── 1. Failure: filter to sfc works (@test_tidy.R#17) ──────────────────────────
d %>% filter(!st_is_empty(geometry)) not identical to d[1, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
── 2. Failure: filter to sfc works (@test_tidy.R#19) ──────────────────────────
d %>% filter(st_is(geometry, "POINT")) not identical to d[1:2, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
Failed to create feature 1 in x
Failed to create feature 1 in x
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 704 | SKIPPED: 55 | WARNINGS: 6 | FAILED: 2 ]
1. Failure: filter to sfc works (@test_tidy.R#17)
2. Failure: filter to sfc works (@test_tidy.R#19)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.9-3
Check: tests
Result: ERROR
Running ‘aggregate.R’ [1s/2s]
Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ...4c4
< Linking to GEOS 3.8.1, GDAL 3.0.4, PROJ 7.0.1
---
> Linking to GEOS 3.8.0, GDAL 3.0.2, PROJ 6.2.1
Running ‘cast.R’ [1s/2s]
Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK
Running ‘crs.R’ [2s/2s]
Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ...70,72d69
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running ‘dist.R’ [2s/2s]
Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ... OK
Running ‘dplyr.R’ [8s/9s]
Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ...69d68
< `summarise()` ungrouping output (override with `.groups` argument)
83d81
< `summarise()` ungrouping output (override with `.groups` argument)
174d171
< `summarise()` ungrouping output (override with `.groups` argument)
268,272d264
< Warning message:
< The `keep` argument of `group_split()` is deprecated as of dplyr 1.0.0.
< Please use the `.keep` argument instead.
< This warning is displayed once every 8 hours.
< Call `lifecycle::last_warnings()` to see where this warning was generated.
Running ‘empty.R’ [1s/2s]
Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK
Running ‘gdal_geom.R’ [2s/3s]
Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ... OK
Running ‘geos.R’ [12s/13s]
Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ... OK
Running ‘graticule.R’ [4s/5s]
Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK
Running ‘grid.R’ [2s/2s]
Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK
Running ‘maps.R’ [4s/4s]
Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ... OK
Running ‘plot.R’ [11s/12s]
Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ...25,27d24
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running ‘read.R’ [3s/5s]
Comparing ‘read.Rout’ to ‘read.Rout.save’ ...330c330
< Reading layer `tst__' from data source `/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
---
> Reading layer `tst__' from data source `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
351a352,358
> > proc.time()
> user system elapsed
> <<<<<<< HEAD
> 1.502 0.090 1.590
> =======
> 1.166 0.068 1.230
> >>>>>>> gdal3
Running ‘roundtrip.R’ [11s/12s]
Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ...48,50d47
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
52,54d48
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
57,60c51,52
< Warning messages:
< 1: In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
< 2: In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
---
> Warning message:
> In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
63,65d54
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
67,69d55
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
71,73d56
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
114a98,100
> Warning message:
> In CPL_crs_from_input(x) :
> GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order.
162c148
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running ‘sample.R’ [1s/2s]
Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK
Running ‘sfc.R’ [13s/14s]
Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ...335c335
< "3.8.1" "3.0.4" "7.0.1"
---
> "3.8.0" "3.0.4" "7.0.0"
568,570c568,570
< 1 1 5 b POINT (0 0)
< 2 2 6 c POINT (1 1)
< 3 NA 2 a POINT EMPTY
---
> 1 NA 2 a POINT EMPTY
> 2 1 5 b POINT (0 0)
> 3 2 6 c POINT (1 1)
641c641
< Reading layer `nc' from data source `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sf/shape/nc.shp' using driver `ESRI Shapefile'
---
> Reading layer `nc' from data source `/home/edzer/git/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
815,821d814
< New names:
< * AREA -> AREA...1
< * PERIMETER -> PERIMETER...2
< * CNTY_ -> CNTY_...3
< * AREA -> AREA...16
< * PERIMETER -> PERIMETER...17
< * ...
858,860d850
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
Running ‘sfg.R’ [1s/1s]
Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK
Running ‘spatstat.R’ [5s/5s]
Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ...198c198
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running ‘stars.R’ [4s/4s]
Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...125c125
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running ‘testthat.R’ [12s/14s]
Running ‘units.R’ [2s/2s]
Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK
Running ‘wkb.R’ [1s/2s]
Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> suppressPackageStartupMessages(library(sf))
>
> test_check("sf")
proj_create: Cannot find proj.db
proj_create: Cannot find proj.db
proj_create_operation_factory_context: Cannot find proj.db
pj_obj_create: Cannot find proj.db
pj_obj_create: Cannot find proj.db
Cannot open layer foo
Reading layer `nospatial' from data source `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sf/gpkg/nospatial.gpkg' using driver `GPKG'
Reading layer `nospatial' from data source `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/sf/gpkg/nospatial.gpkg' using driver `GPKG'
OGR: Unsupported geometry type
── 1. Failure: filter to sfc works (@test_tidy.R#17) ──────────────────────────
d %>% filter(!st_is_empty(geometry)) not identical to d[1, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
── 2. Failure: filter to sfc works (@test_tidy.R#19) ──────────────────────────
d %>% filter(st_is(geometry, "POINT")) not identical to d[1:2, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
Failed to create feature 1 in x
Failed to create feature 1 in x
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 697 | SKIPPED: 59 | WARNINGS: 8 | FAILED: 2 ]
1. Failure: filter to sfc works (@test_tidy.R#17)
2. Failure: filter to sfc works (@test_tidy.R#19)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.9-3
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘RPostgres’
Flavor: r-patched-solaris-x86
Version: 0.9-3
Check: tests
Result: ERROR
Running ‘aggregate.R’
Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ...4c4
< Linking to GEOS 3.6.3, GDAL 2.2.4, PROJ 5.2.0
---
> Linking to GEOS 3.8.0, GDAL 3.0.2, PROJ 6.2.1
Running ‘cast.R’
Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK
Running ‘crs.R’
Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ...54c54
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
Running ‘dist.R’
Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ...54c54
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
Running ‘dplyr.R’ [12s/13s]
Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ...69d68
< `summarise()` ungrouping output (override with `.groups` argument)
74c73
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
81c80
< 4 (0.15,0.2… 0.190 (((-8532272 4151181, -8529886 4149052, -8543756 41433…
---
> 4 (0.15,0.2… 0.190 (((-8685774 4073056, -8684147 4070879, -8683670 40671…
83d81
< `summarise()` ungrouping output (override with `.groups` argument)
107c105
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
122c120
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
137c135
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
156c154
< CRS: EPSG:3857
---
> projected CRS: WGS 84 / Pseudo-Mercator
174d171
< `summarise()` ungrouping output (override with `.groups` argument)
182c179
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
186c183
< 1 2.593234e-06 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72, 84006…
---
> 1 2.593234e-06 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88, 6485…
192c189
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
196c193
< 1 2.589362e-06 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72, 8…
---
> 1 2.589362e-06 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, 70…
204c201
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
208c205
< 1 329962 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72,…
---
> 1 329962 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88…
214c211
< CRS: EPSG:32119
---
> projected CRS: NAD83 / North Carolina
218c215
< 1 329962 (((834893.7 95747.49, 833834.2 98254.6, 835420.2 98655.72,…
---
> 1 329962 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, …
268,272d264
< Warning message:
< The `keep` argument of `group_split()` is deprecated as of dplyr 1.0.0.
< Please use the `.keep` argument instead.
< This warning is displayed once every 8 hours.
< Call `lifecycle::last_warnings()` to see where this warning was generated.
Running ‘empty.R’
Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK
Running ‘gdal_geom.R’
Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ...245c245
< [1,] 1760244757 0.114
---
> [1,] 1760244967 0.114
284a285,287
> Warning message:
> In st_buffer.sfc(sfc, units::set_units(0.1, rad)) :
> st_buffer does not correctly buffer longitude/latitude data
Running ‘geos.R’ [19s/23s]
Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ...85c85
< CRS: 4267
---
> geographic CRS: NAD27
559a560,573
> LINESTRING (3 3, 2 2, 1 1)
> Geometry set for 1 feature
> geometry type: LINESTRING
> dimension: XY
> bbox: xmin: 1 ymin: 1 xmax: 3 ymax: 3
> CRS: NA
> LINESTRING (3 3, 2 2, 1 1)
> Simple feature collection with 1 feature and 1 field
> geometry type: LINESTRING
> dimension: XY
> bbox: xmin: 1 ymin: 1 xmax: 3 ymax: 3
> CRS: NA
> a geom
> 1 2 LINESTRING (3 3, 2 2, 1 1)
Running ‘graticule.R’
Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK
Running ‘grid.R’
Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK
Running ‘maps.R’
Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ...12c12
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
26c26
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
39c39
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
57c57
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
75c75
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
93c93
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
Running ‘plot.R’ [20s/22s]
Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ... OK
Running ‘read.R’
Comparing ‘read.Rout’ to ‘read.Rout.save’ ...68c68
< CRS: 4326
---
> geographic CRS: WGS 84
93c93
< CRS: 4267
---
> geographic CRS: NAD27
268c268
< CRS: EPSG:32632
---
> projected CRS: WGS 84 / UTM zone 32N
278c278
< CRS: EPSG:32632
---
> projected CRS: WGS 84 / UTM zone 32N
292c292
< CRS: EPSG:32632
---
> projected CRS: WGS 84 / UTM zone 32N
330c330
< Reading layer `tst__' from data source `/home/ripley/R/packages/tests32/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
---
> Reading layer `tst__' from data source `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
335c335
< CRS: 4267
---
> geographic CRS: NAD27
351a352,358
> > proc.time()
> user system elapsed
> <<<<<<< HEAD
> 1.502 0.090 1.590
> =======
> 1.166 0.068 1.230
> >>>>>>> gdal3
Running ‘roundtrip.R’ [12s/13s]
Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ...97a98,100
> Warning message:
> In CPL_crs_from_input(x) :
> GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order.
145c148
< Reading layer `nc.gpkg' from data source `/home/ripley/R/Lib32/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
150c153
< CRS: 4267
---
> geographic CRS: NAD27
154d156
< [3] "Component 15: Attributes: < Component \"crs\": Component \"input\": 1 string mismatch >"
Running ‘sample.R’
Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK
Running ‘sfc.R’ [17s/18s]
Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ...161c161
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
335c335
< "3.6.3" "2.2.4" "5.2.0"
---
> "3.8.0" "3.0.4" "7.0.0"
469c469
< User input: 4267
---
> User input: NAD27
471,476c471,484
< GEOGCS["GCS_North_American_1927",
< DATUM["North_American_Datum_1927",
< SPHEROID["Clarke_1866",6378206.4,294.9786982]],
< PRIMEM["Greenwich",0],
< UNIT["Degree",0.017453292519943295],
< AUTHORITY["EPSG","4267"]]
---
> GEOGCRS["NAD27",
> DATUM["North American Datum 1927",
> ELLIPSOID["Clarke 1866",6378206.4,294.978698213898,
> LENGTHUNIT["metre",1]]],
> PRIMEM["Greenwich",0,
> ANGLEUNIT["degree",0.0174532925199433]],
> CS[ellipsoidal,2],
> AXIS["latitude",north,
> ORDER[1],
> ANGLEUNIT["degree",0.0174532925199433]],
> AXIS["longitude",east,
> ORDER[2],
> ANGLEUNIT["degree",0.0174532925199433]],
> ID["EPSG",4267]]
560,562c568,570
< 1 1 5 b POINT (0 0)
< 2 2 6 c POINT (1 1)
< 3 NA 2 a POINT EMPTY
---
> 1 NA 2 a POINT EMPTY
> 2 1 5 b POINT (0 0)
> 3 2 6 c POINT (1 1)
633c641
< Reading layer `nc' from data source `/home/ripley/R/Lib32/sf/shape/nc.shp' using driver `ESRI Shapefile'
---
> Reading layer `nc' from data source `/home/edzer/git/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
638c646
< CRS: 4267
---
> geographic CRS: NAD27
650c658
< CRS: EPSG:2264
---
> projected CRS: NAD83 / North Carolina (ftUS)
684c692
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
710c718
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
731c739
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
767c775
< CRS: EPSG:2264
---
> projected CRS: NAD83 / North Carolina (ftUS)
782c790
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
807,813d814
< New names:
< * AREA -> AREA...1
< * PERIMETER -> PERIMETER...2
< * CNTY_ -> CNTY_...3
< * AREA -> AREA...16
< * PERIMETER -> PERIMETER...17
< * ...
945c946
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
953c954
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
968c969
< CRS: 4326
---
> geographic CRS: WGS 84
979c980
< CRS: 4326
---
> geographic CRS: WGS 84
991c992
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
1004c1005
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
Running ‘sfg.R’
Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK
Running ‘spatstat.R’
Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ...198c198
< Reading layer `nc.gpkg' from data source `/home/ripley/R/Lib32/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
203c203
< CRS: 4267
---
> geographic CRS: NAD27
Running ‘stars.R’
Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...107c107
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
118c118
< CRS: EPSG:4326
---
> geographic CRS: WGS 84
125c125
< Reading layer `nc.gpkg' from data source `/home/ripley/R/Lib32/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
131c131
< CRS: 4267
---
> geographic CRS: NAD27
144,145c144,145
< x 1 461 -84.3239 0.0192484 GEOGCS["NAD27",DATUM["Nor... FALSE NULL [x]
< y 1 141 36.5896 -0.0192484 GEOGCS["NAD27",DATUM["Nor... FALSE NULL [y]
---
> x 1 461 -84.3239 0.0192484 NAD27 FALSE NULL [x]
> y 1 141 36.5896 -0.0192484 NAD27 FALSE NULL [y]
150c150
< CRS: GEOGCS["NAD27",DATUM["North_American_Datum_1927",SPHEROID["Clarke 1866",6378206.4,294.9786982138982,AUTHORITY["EPSG","7008"]],AUTHORITY["EPSG","6267"]],PRIMEM["Greenwich",0],UNIT["degree",0.0174532925199433],AUTHORITY["EPSG","4267"]]
---
> geographic CRS: NAD27
167c167
< CRS: GEOGCS["NAD27",DATUM["North_American_Datum_1927",SPHEROID["Clarke 1866",6378206.4,294.9786982138982,AUTHORITY["EPSG","7008"]],AUTHORITY["EPSG","6267"]],PRIMEM["Greenwich",0],UNIT["degree",0.0174532925199433],AUTHORITY["EPSG","4267"]]
---
> geographic CRS: NAD27
184c184
< CRS: GEOGCS["NAD27",DATUM["North_American_Datum_1927",SPHEROID["Clarke 1866",6378206.4,294.9786982138982,AUTHORITY["EPSG","7008"]],AUTHORITY["EPSG","6267"]],PRIMEM["Greenwich",0],UNIT["degree",0.0174532925199433],AUTHORITY["EPSG","4267"]]
---
> geographic CRS: NAD27
Running ‘testthat.R’ [25s/57s]
Running ‘units.R’
Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK
Running ‘wkb.R’
Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> suppressPackageStartupMessages(library(sf))
>
> test_check("sf")
Cannot open layer foo
Reading layer `nospatial' from data source `/home/ripley/R/Lib32/sf/gpkg/nospatial.gpkg' using driver `GPKG'
Reading layer `nospatial' from data source `/home/ripley/R/Lib32/sf/gpkg/nospatial.gpkg' using driver `GPKG'
OGR: Unsupported geometry type
── 1. Failure: filter to sfc works (@test_tidy.R#17) ──────────────────────────
d %>% filter(!st_is_empty(geometry)) not identical to d[1, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
── 2. Failure: filter to sfc works (@test_tidy.R#19) ──────────────────────────
d %>% filter(st_is(geometry, "POINT")) not identical to d[1:2, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
Failed to create feature 1 in x
Failed to create feature 1 in x
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 688 | SKIPPED: 13 | WARNINGS: 8 | FAILED: 2 ]
1. Failure: filter to sfc works (@test_tidy.R#17)
2. Failure: filter to sfc works (@test_tidy.R#19)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.9-3
Check: tests
Result: ERROR
Running ‘aggregate.R’ [1s/1s]
Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ...4c4
< Linking to GEOS 3.8.1, GDAL 3.0.4, PROJ 7.0.1
---
> Linking to GEOS 3.8.0, GDAL 3.0.2, PROJ 6.2.1
Running ‘cast.R’ [1s/1s]
Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK
Running ‘crs.R’ [1s/1s]
Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ...70,72d69
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running ‘dist.R’ [1s/1s]
Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ... OK
Running ‘dplyr.R’ [5s/5s]
Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ...69d68
< `summarise()` ungrouping output (override with `.groups` argument)
83d81
< `summarise()` ungrouping output (override with `.groups` argument)
174d171
< `summarise()` ungrouping output (override with `.groups` argument)
268,272d264
< Warning message:
< The `keep` argument of `group_split()` is deprecated as of dplyr 1.0.0.
< Please use the `.keep` argument instead.
< This warning is displayed once every 8 hours.
< Call `lifecycle::last_warnings()` to see where this warning was generated.
Running ‘empty.R’ [1s/1s]
Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK
Running ‘gdal_geom.R’ [1s/1s]
Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ... OK
Running ‘geos.R’ [6s/6s]
Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ... OK
Running ‘graticule.R’ [2s/2s]
Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK
Running ‘grid.R’ [1s/1s]
Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK
Running ‘maps.R’ [2s/2s]
Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ... OK
Running ‘plot.R’ [6s/6s]
Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ...25,27d24
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running ‘read.R’ [2s/3s]
Comparing ‘read.Rout’ to ‘read.Rout.save’ ...330c330
< Reading layer `tst__' from data source `/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
---
> Reading layer `tst__' from data source `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
351a352,358
> > proc.time()
> user system elapsed
> <<<<<<< HEAD
> 1.502 0.090 1.590
> =======
> 1.166 0.068 1.230
> >>>>>>> gdal3
Running ‘roundtrip.R’ [6s/6s]
Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ...48,50d47
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
52,54d48
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
57,60c51,52
< Warning messages:
< 1: In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
< 2: In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
---
> Warning message:
> In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
63,65d54
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
67,69d55
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
71,73d56
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
114a98,100
> Warning message:
> In CPL_crs_from_input(x) :
> GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order.
162c148
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running ‘sample.R’ [1s/1s]
Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK
Running ‘sfc.R’ [7s/7s]
Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ...335c335
< "3.8.1" "3.0.4" "7.0.1"
---
> "3.8.0" "3.0.4" "7.0.0"
568,570c568,570
< 1 1 5 b POINT (0 0)
< 2 2 6 c POINT (1 1)
< 3 NA 2 a POINT EMPTY
---
> 1 NA 2 a POINT EMPTY
> 2 1 5 b POINT (0 0)
> 3 2 6 c POINT (1 1)
641c641
< Reading layer `nc' from data source `/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/sf/shape/nc.shp' using driver `ESRI Shapefile'
---
> Reading layer `nc' from data source `/home/edzer/git/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
815,821d814
< New names:
< * AREA -> AREA...1
< * PERIMETER -> PERIMETER...2
< * CNTY_ -> CNTY_...3
< * AREA -> AREA...16
< * PERIMETER -> PERIMETER...17
< * ...
858,860d850
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
Running ‘sfg.R’ [1s/1s]
Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK
Running ‘spatstat.R’ [3s/3s]
Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ...198c198
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running ‘stars.R’ [3s/4s]
Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...125c125
< Reading layer `nc.gpkg' from data source `/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/sf/gpkg/nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running ‘testthat.R’ [12s/51s]
Running ‘units.R’ [2s/2s]
Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK
Running ‘wkb.R’ [1s/1s]
Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> suppressPackageStartupMessages(library(sf))
>
> test_check("sf")
proj_create: Cannot find proj.db
proj_create: Cannot find proj.db
proj_create_operation_factory_context: Cannot find proj.db
pj_obj_create: Cannot find proj.db
pj_obj_create: Cannot find proj.db
Cannot open layer foo
Reading layer `nospatial' from data source `/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/sf/gpkg/nospatial.gpkg' using driver `GPKG'
Reading layer `nospatial' from data source `/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/sf/gpkg/nospatial.gpkg' using driver `GPKG'
OGR: Unsupported geometry type
── 1. Failure: filter to sfc works (@test_tidy.R#17) ──────────────────────────
d %>% filter(!st_is_empty(geometry)) not identical to d[1, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
── 2. Failure: filter to sfc works (@test_tidy.R#19) ──────────────────────────
d %>% filter(st_is(geometry, "POINT")) not identical to d[1:2, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
Failed to create feature 1 in x
Failed to create feature 1 in x
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 697 | SKIPPED: 59 | WARNINGS: 8 | FAILED: 2 ]
1. Failure: filter to sfc works (@test_tidy.R#17)
2. Failure: filter to sfc works (@test_tidy.R#19)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-linux-x86_64
Version: 0.9-3
Check: running examples for arch ‘i386’
Result: ERROR
Running examples in 'sf-Ex.R' failed
The error most likely occurred in:
> ### Name: bind
> ### Title: Bind rows (features) of sf objects
> ### Aliases: bind rbind.sf cbind.sf st_bind_cols
>
> ### ** Examples
>
> crs = st_crs(3857)
> a = st_sf(a=1, geom = st_sfc(st_point(0:1)), crs = crs)
> b = st_sf(a=1, geom = st_sfc(st_linestring(matrix(1:4,2))), crs = crs)
> c = st_sf(a=4, geom = st_sfc(st_multilinestring(list(matrix(1:4,2)))), crs = crs)
> rbind(a,b,c)
Simple feature collection with 3 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
3 4 MULTILINESTRING ((1 3, 2 4))
> rbind(a,b)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
> rbind(a,b)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
> rbind(b,c)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 1 ymin: 3 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 LINESTRING (1 3, 2 4)
2 4 MULTILINESTRING ((1 3, 2 4))
> cbind(a,b,c) # warns
Simple feature collection with 1 feature and 3 fields
Active geometry column: geom
geometry type: POINT
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 0 ymax: 1
projected CRS: WGS 84 / Pseudo-Mercator
a a.1 a.2 geom geom.1 geom.2
1 1 1 4 POINT (0 1) LINESTRING (1 3, 2 4) MULTILINESTRING ((1 3, 2 4))
> if (require(dplyr))
+ dplyr::bind_cols(a,b)
Loading required package: dplyr
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
New names:
* a -> a...1
* geom -> geom...2
* a -> a...3
* geom -> geom...4
Error in st_geometry.sf(x) :
attr(obj, "sf_column") does not point to a geometry column.
Did you rename it, without setting st_geometry(obj) <- "newname"?
Calls: <Anonymous> -> print.sf -> print -> st_geometry -> st_geometry.sf
Execution halted
Flavor: r-release-windows-ix86+x86_64
Version: 0.9-3
Check: running examples for arch ‘x64’
Result: ERROR
Running examples in 'sf-Ex.R' failed
The error most likely occurred in:
> ### Name: bind
> ### Title: Bind rows (features) of sf objects
> ### Aliases: bind rbind.sf cbind.sf st_bind_cols
>
> ### ** Examples
>
> crs = st_crs(3857)
> a = st_sf(a=1, geom = st_sfc(st_point(0:1)), crs = crs)
> b = st_sf(a=1, geom = st_sfc(st_linestring(matrix(1:4,2))), crs = crs)
> c = st_sf(a=4, geom = st_sfc(st_multilinestring(list(matrix(1:4,2)))), crs = crs)
> rbind(a,b,c)
Simple feature collection with 3 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
3 4 MULTILINESTRING ((1 3, 2 4))
> rbind(a,b)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
> rbind(a,b)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 POINT (0 1)
2 1 LINESTRING (1 3, 2 4)
> rbind(b,c)
Simple feature collection with 2 features and 1 field
geometry type: GEOMETRY
dimension: XY
bbox: xmin: 1 ymin: 3 xmax: 2 ymax: 4
projected CRS: WGS 84 / Pseudo-Mercator
a geom
1 1 LINESTRING (1 3, 2 4)
2 4 MULTILINESTRING ((1 3, 2 4))
> cbind(a,b,c) # warns
Simple feature collection with 1 feature and 3 fields
Active geometry column: geom
geometry type: POINT
dimension: XY
bbox: xmin: 0 ymin: 1 xmax: 0 ymax: 1
projected CRS: WGS 84 / Pseudo-Mercator
a a.1 a.2 geom geom.1 geom.2
1 1 1 4 POINT (0 1) LINESTRING (1 3, 2 4) MULTILINESTRING ((1 3, 2 4))
> if (require(dplyr))
+ dplyr::bind_cols(a,b)
Loading required package: dplyr
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
New names:
* a -> a...1
* geom -> geom...2
* a -> a...3
* geom -> geom...4
Error in st_geometry.sf(x) :
attr(obj, "sf_column") does not point to a geometry column.
Did you rename it, without setting st_geometry(obj) <- "newname"?
Calls: <Anonymous> -> print.sf -> print -> st_geometry -> st_geometry.sf
Execution halted
Flavor: r-release-windows-ix86+x86_64
Version: 0.9-3
Check: running tests for arch ‘i386’
Result: ERROR
Running 'aggregate.R' [1s]
Comparing 'aggregate.Rout' to 'aggregate.Rout.save' ...4c4
< Linking to GEOS 3.8.0, GDAL 3.0.4, PROJ 6.3.1
---
> Linking to GEOS 3.8.0, GDAL 3.0.2, PROJ 6.2.1
Running 'cast.R' [1s]
Comparing 'cast.Rout' to 'cast.Rout.save' ... OK
Running 'crs.R' [2s]
Comparing 'crs.Rout' to 'crs.Rout.save' ...70,72d69
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running 'dist.R' [1s]
Comparing 'dist.Rout' to 'dist.Rout.save' ... OK
Running 'dplyr.R' [6s]
Comparing 'dplyr.Rout' to 'dplyr.Rout.save' ...69d68
< `summarise()` ungrouping output (override with `.groups` argument)
73c72
< bbox: xmin: -9386879 ymin: 4012985 xmax: -8399792 ymax: 4382074
---
> bbox: xmin: -9386880 ymin: 4012991 xmax: -8399788 ymax: 4382079
78,81c77,80
< 1 (0,0.1] 0.0760 (((-8678518 4054258, -8679090 4061398, -8680138 40615~
< 2 (0.1,0.12] 0.112 (((-9383226 4192545, -9375979 4199504, -9370834 41966~
< 3 (0.12,0.1~ 0.134 (((-8520834 4108024, -8522044 4111111, -8520108 41115~
< 4 (0.15,0.2~ 0.190 (((-8685776 4073050, -8684148 4070872, -8683671 40671~
---
> 1 (0,0.1] 0.0760 (((-8678517 4054264, -8679088 4061405, -8680136 40615â<c2><80>¦
> 2 (0.1,0.12] 0.112 (((-9383227 4192541, -9375980 4199500, -9370835 41966â<c2><80>¦
> 3 (0.12,0.1â<c2><80>¦ 0.134 (((-8520830 4108031, -8522040 4111119, -8520104 41115â<c2><80>¦
> 4 (0.15,0.2â<c2><80>¦ 0.190 (((-8685774 4073056, -8684147 4070879, -8683670 40671â<c2><80>¦
83d81
< `summarise()` ungrouping output (override with `.groups` argument)
106c104
< bbox: xmin: -8802506 ymin: 4012985 xmax: -8492272 ymax: 4166159
---
> bbox: xmin: -8802506 ymin: 4012991 xmax: -8492268 ymax: 4166167
111,116c109,114
< 1 95 (((-8588149 4131915, -8589852 4133296, -8589358 4135190, -8~ SID79 4
< 2 96 (((-8712000 4081952, -8719512 4077857, -8731642 4078857, -8~ SID79 5
< 3 97 (((-8685776 4073050, -8697388 4077816, -8700121 4077563, -8~ SID79 3
< 4 98 (((-8755886 4021930, -8802506 4069789, -8798771 4071773, -8~ SID79 17
< 5 99 (((-8678518 4054258, -8679090 4061398, -8680138 4061543, -8~ SID79 9
< 6 100 (((-8755886 4021930, -8753548 4025863, -8753053 4030189, -8~ SID79 6
---
> 1 95 (((-8588146 4131923, -8589850 4133303, -8589356 4135198, -8â<c2><80>¦ SID79 4
> 2 96 (((-8711999 4081959, -8719511 4077863, -8731642 4078864, -8â<c2><80>¦ SID79 5
> 3 97 (((-8685774 4073056, -8697387 4077823, -8700120 4077570, -8â<c2><80>¦ SID79 3
> 4 98 (((-8755885 4021935, -8802506 4069795, -8798771 4071779, -8â<c2><80>¦ SID79 17
> 5 99 (((-8678517 4054264, -8679088 4061405, -8680136 4061550, -8â<c2><80>¦ SID79 9
> 6 100 (((-8755885 4021935, -8753548 4025868, -8753052 4030195, -8â<c2><80>¦ SID79 6
121c119
< bbox: xmin: -9099356 ymin: 4310656 xmax: -8434990 ymax: 4382074
---
> bbox: xmin: -9099356 ymin: 4310668 xmax: -8434988 ymax: 4382079
126,131c124,129
< 1 1 (((-9069486 4332928, -9077065 4338195, -9079419 4338345, -9~ 1 0
< 2 2 (((-9043563 4351024, -9043652 4352966, -9046118 4356510, -9~ 0 3
< 3 3 (((-8956336 4334060, -8958567 4335740, -8965302 4336017, -8~ 5 6
< 4 4 (((-8461242 4344697, -8462174 4347203, -8463903 4346960, -8~ 1 2
< 5 5 (((-8595797 4333842, -8597684 4330201, -8604809 4329777, -8~ 9 3
< 6 6 (((-8543186 4332866, -8569416 4332359, -8570982 4333096, -8~ 7 5
---
> 1 1 (((-9069486 4332934, -9077066 4338201, -9079419 4338351, -9â<c2><80>¦ 1 0
> 2 2 (((-9043562 4351030, -9043652 4352973, -9046117 4356516, -9â<c2><80>¦ 0 3
> 3 3 (((-8956335 4334068, -8958566 4335747, -8965300 4336025, -8â<c2><80>¦ 5 6
> 4 4 (((-8461241 4344709, -8462173 4347214, -8463902 4346972, -8â<c2><80>¦ 1 2
> 5 5 (((-8595797 4333852, -8597683 4330212, -8604808 4329788, -8â<c2><80>¦ 9 3
> 6 6 (((-8543185 4332878, -8569416 4332369, -8570981 4333107, -8â<c2><80>¦ 7 5
136c134
< bbox: xmin: -9099356 ymin: 4310656 xmax: -8434990 ymax: 4382074
---
> bbox: xmin: -9099356 ymin: 4310668 xmax: -8434988 ymax: 4382079
141,146c139,144
< 1 (((-9069486 4332928, -9077065 4338195, -9079419 4338345, -9~ 1 1 0
< 2 (((-9043563 4351024, -9043652 4352966, -9046118 4356510, -9~ 2 0 3
< 3 (((-8956336 4334060, -8958567 4335740, -8965302 4336017, -8~ 3 5 6
< 4 (((-8461242 4344697, -8462174 4347203, -8463903 4346960, -8~ 4 1 2
< 5 (((-8595797 4333842, -8597684 4330201, -8604809 4329777, -8~ 5 9 3
< 6 (((-8543186 4332866, -8569416 4332359, -8570982 4333096, -8~ 6 7 5
---
> 1 (((-9069486 4332934, -9077066 4338201, -9079419 4338351, -9â<c2><80>¦ 1 1 0
> 2 (((-9043562 4351030, -9043652 4352973, -9046117 4356516, -9â<c2><80>¦ 2 0 3
> 3 (((-8956335 4334068, -8958566 4335747, -8965300 4336025, -8â<c2><80>¦ 3 5 6
> 4 (((-8461241 4344709, -8462173 4347214, -8463902 4346972, -8â<c2><80>¦ 4 1 2
> 5 (((-8595797 4333852, -8597683 4330212, -8604808 4329788, -8â<c2><80>¦ 5 9 3
> 6 (((-8543185 4332878, -8569416 4332369, -8570981 4333107, -8â<c2><80>¦ 6 7 5
174d171
< `summarise()` ungrouping output (override with `.groups` argument)
181c178
< bbox: xmin: 123829.8 ymin: 14740.06 xmax: 930518.6 ymax: 318255.5
---
> bbox: xmin: 123829 ymin: 14744.69 xmax: 930521.8 ymax: 318259.9
186c183
< 1 2.593264e-06 (((705428.2 49242.97, 705860.3 27430.49, 698896.5 18674.82, 6485~
---
> 1 2.593234e-06 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88, 6485â<c2><80>¦
191c188
< bbox: xmin: 123829.8 ymin: 14740.06 xmax: 930518.6 ymax: 318255.5
---
> bbox: xmin: 123829 ymin: 14744.69 xmax: 930521.8 ymax: 318259.9
196c193
< 1 2.589402e-06 (((724643.2 62311.01, 714304.8 49727.85, 711690.8 35991.28, ~
---
> 1 2.589362e-06 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, 70â<c2><80>¦
203c200
< bbox: xmin: 123829.8 ymin: 14740.06 xmax: 930518.6 ymax: 318255.5
---
> bbox: xmin: 123829 ymin: 14744.69 xmax: 930521.8 ymax: 318259.9
208c205
< 1 329962 (((705428.2 49242.97, 705860.3 27430.49, 698896.5 18674.82~
---
> 1 329962 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88â<c2><80>¦
213c210
< bbox: xmin: 123829.8 ymin: 14740.06 xmax: 930518.6 ymax: 318255.5
---
> bbox: xmin: 123829 ymin: 14744.69 xmax: 930521.8 ymax: 318259.9
216c213
< `sum(A * new_dens~ geometry
---
> `sum(A * new_densâ<c2><80>¦ geometry
218c215
< 1 329962 (((724643.2 62311.01, 714304.8 49727.85, 711690.8 35991.28~
---
> 1 329962 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, â<c2><80>¦
268,272d264
< Warning message:
< The `keep` argument of `group_split()` is deprecated as of dplyr 1.0.0.
< Please use the `.keep` argument instead.
< This warning is displayed once every 8 hours.
< Call `lifecycle::last_warnings()` to see where this warning was generated.
Running 'empty.R' [1s]
Comparing 'empty.Rout' to 'empty.Rout.save' ... OK
Running 'gdal_geom.R' [2s]
Comparing 'gdal_geom.Rout' to 'gdal_geom.Rout.save' ...245,249c245,249
< [1,] 1760230516 0.114
< [2,] 946417787 0.061
< [3,] 2202223078 0.143
< [4,] 1074332698 0.070
< [5,] 2352528086 0.153
---
> [1,] 1760244967 0.114
> [2,] 946435667 0.061
> [3,] 2202248253 0.143
> [4,] 1074351919 0.070
> [5,] 2352539533 0.153
278c278
< Error : cannot convert km into °
---
> Error : cannot convert km into °
284a285,287
> Warning message:
> In st_buffer.sfc(sfc, units::set_units(0.1, rad)) :
> st_buffer does not correctly buffer longitude/latitude data
Running 'geos.R' [13s]
Comparing 'geos.Rout' to 'geos.Rout.save' ...13,22c13,22
< [1,] 0.00 0.00 25651.99 440561.48 299772.34 361529.73 419671.66
< [2,] 0.00 0.00 0.00 409429.44 268945.05 332590.52 388545.58
< [3,] 25651.99 0.00 0.00 367556.52 227018.38 290298.04 346669.14
< [4,] 440561.48 409429.44 367556.52 0.00 67226.86 45537.62 0.00
< [5,] 299772.34 268945.05 227018.38 67226.86 0.00 0.00 46527.56
< [6,] 361529.73 332590.52 290298.04 45537.62 0.00 0.00 30213.17
< [7,] 419671.66 388545.58 346669.14 0.00 46527.56 30213.17 0.00
< [8,] 384593.29 354295.06 312351.76 16130.19 11926.86 0.00 0.00
< [9,] 262353.97 231217.73 189310.73 140455.97 0.00 64606.27 119564.00
< [10,] 71138.53 41943.71 0.00 330752.58 190183.42 252373.26 309863.33
---
> [1,] 0.00 0.00 25652.53 440561.15 299772.18 361529.53 419671.2
> [2,] 0.00 0.00 0.00 409428.54 268944.31 332589.77 388544.5
> [3,] 25652.53 0.00 0.00 367555.48 227017.51 290297.10 346667.9
> [4,] 440561.15 409428.54 367555.48 0.00 67226.86 45537.55 0.0
> [5,] 299772.18 268944.31 227017.51 67226.86 0.00 0.00 46527.4
> [6,] 361529.53 332589.77 290297.10 45537.55 0.00 0.00 30213.0
> [7,] 419671.16 388544.52 346667.93 0.00 46527.40 30213.00 0.0
> [8,] 384592.90 354294.11 312350.68 16130.34 11926.81 0.00 0.0
> [9,] 262354.29 231217.49 189310.35 140455.87 0.00 64606.24 119563.7
> [10,] 71139.29 41943.83 0.00 330751.39 190182.39 252372.06 309862.0
24,33c24,33
< [1,] 384593.29 262353.97 71138.53
< [2,] 354295.06 231217.73 41943.71
< [3,] 312351.76 189310.73 0.00
< [4,] 16130.19 140455.97 330752.58
< [5,] 11926.86 0.00 190183.42
< [6,] 0.00 64606.27 252373.26
< [7,] 0.00 119564.00 309863.33
< [8,] 0.00 85533.33 275391.07
< [9,] 85533.33 0.00 152489.45
< [10,] 275391.07 152489.45 0.00
---
> [1,] 384592.90 262354.29 71139.29
> [2,] 354294.11 231217.49 41943.83
> [3,] 312350.68 189310.35 0.00
> [4,] 16130.34 140455.87 330751.39
> [5,] 11926.81 0.00 190182.39
> [6,] 0.00 64606.24 252372.06
> [7,] 0.00 119563.73 309861.97
> [8,] 0.00 85533.12 275389.78
> [9,] 85533.12 0.00 152488.92
> [10,] 275389.78 152488.92 0.00
Running 'graticule.R' [3s]
Comparing 'graticule.Rout' to 'graticule.Rout.save' ... OK
Running 'grid.R' [2s]
Comparing 'grid.Rout' to 'grid.Rout.save' ... OK
Running 'maps.R' [3s]
Comparing 'maps.Rout' to 'maps.Rout.save' ... OK
Running 'plot.R' [10s]
Comparing 'plot.Rout' to 'plot.Rout.save' ...25,27d24
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running 'read.R' [3s]
Comparing 'read.Rout' to 'read.Rout.save' ...286c286
< 2 POINT (367470.5 4962415)
---
> 2 POINT (367470.5 4962414)
330c330
< Reading layer `tst__' from data source `d:\RCompile\CRANpkg\local\4.0\sf.Rcheck\tests_i386\tst__.gpkg' using driver `GPKG'
---
> Reading layer `tst__' from data source `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
351a352,358
> > proc.time()
> user system elapsed
> <<<<<<< HEAD
> 1.502 0.090 1.590
> =======
> 1.166 0.068 1.230
> >>>>>>> gdal3
Running 'roundtrip.R' [12s]
Comparing 'roundtrip.Rout' to 'roundtrip.Rout.save' ...48,50d47
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
52,54d48
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
57,60c51,52
< Warning messages:
< 1: In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
< 2: In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
---
> Warning message:
> In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
63,65d54
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
67,69d55
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
71,73d56
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
114a98,100
> Warning message:
> In CPL_crs_from_input(x) :
> GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order.
162c148
< Reading layer `nc.gpkg' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\gpkg\nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running 'sample.R' [2s]
Comparing 'sample.Rout' to 'sample.Rout.save' ... OK
Running 'sfc.R' [14s]
Comparing 'sfc.Rout' to 'sfc.Rout.save' ...335c335
< "3.8.0" "3.0.4" "6.3.1"
---
> "3.8.0" "3.0.4" "7.0.0"
568,570c568,570
< 1 1 5 b POINT (0 0)
< 2 2 6 c POINT (1 1)
< 3 NA 2 a POINT EMPTY
---
> 1 NA 2 a POINT EMPTY
> 2 1 5 b POINT (0 0)
> 3 2 6 c POINT (1 1)
641c641
< Reading layer `nc' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\shape\nc.shp' using driver `ESRI Shapefile'
---
> Reading layer `nc' from data source `/home/edzer/git/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
657c657
< bbox: xmin: 406265 ymin: 48359.7 xmax: 3052877 ymax: 1044143
---
> bbox: xmin: 406262.2 ymin: 48374.87 xmax: 3052887 ymax: 1044158
672,681c672,681
< 1 10 1364 0 19 A 4 #fb80724d MULTIPOLYGON (((1270813 913...
< 2 10 542 3 12 A 4 #fb80724d MULTIPOLYGON (((1340553 959...
< 3 208 3616 6 260 A 5 #80b1d34d MULTIPOLYGON (((1570586 910...
< 4 123 830 2 145 A 10 #bc80bd4d MULTIPOLYGON (((2881206 948...
< 5 1066 1606 3 1197 A 8 #fccde54d MULTIPOLYGON (((2525700 911...
< 6 954 1838 5 1237 A 9 #d9d9d94d MULTIPOLYGON (((2665112 911...
< 7 115 350 2 139 A 10 #bc80bd4d MULTIPOLYGON (((2881206 948...
< 8 254 594 2 371 A 9 #d9d9d94d MULTIPOLYGON (((2717988 951...
< 9 748 1190 2 844 A 8 #fccde54d MULTIPOLYGON (((2203888 914...
< 10 160 2038 5 176 A 5 #80b1d34d MULTIPOLYGON (((1697618 911...
---
> 1 10 1364 0 19 A 4 #fb80724d MULTIPOLYGON (((1270814 913...
> 2 10 542 3 12 A 4 #fb80724d MULTIPOLYGON (((1340555 959...
> 3 208 3616 6 260 A 5 #80b1d34d MULTIPOLYGON (((1570591 910...
> 4 123 830 2 145 A 10 #bc80bd4d MULTIPOLYGON (((2881208 948...
> 5 1066 1606 3 1197 A 8 #fccde54d MULTIPOLYGON (((2525701 911...
> 6 954 1838 5 1237 A 9 #d9d9d94d MULTIPOLYGON (((2665113 911...
> 7 115 350 2 139 A 10 #bc80bd4d MULTIPOLYGON (((2881208 948...
> 8 254 594 2 371 A 9 #d9d9d94d MULTIPOLYGON (((2717989 951...
> 9 748 1190 2 844 A 8 #fccde54d MULTIPOLYGON (((2203890 914...
> 10 160 2038 5 176 A 5 #80b1d34d MULTIPOLYGON (((1697624 911...
774c774
< bbox: xmin: 1200740 ymin: 942534 xmax: 1425790 ymax: 1036850
---
> bbox: xmin: 1200740 ymin: 942550 xmax: 1425790 ymax: 1036860
777,781c777,781
< POINT (1228809 1011240)
< POINT (1233859 956706)
< POINT (1260039 1007646)
< POINT (1271553 1021490)
< POINT (1222551 980299)
---
> POINT (1228809 1011255)
> POINT (1233859 956721)
> POINT (1260039 1007661)
> POINT (1271553 1021505)
> POINT (1222552 980314)
789c789
< bbox: xmin: -81.7408 ymin: 36.2735 xmax: -80.9188 ymax: 36.582
---
> bbox: xmin: -81.7408 ymin: 36.2735 xmax: -80.9188 ymax: 36.5821
792c792
< MULTIPOINT ((-81.3127 36.4803), (-81.2655 36.43...
---
> MULTIPOINT ((-81.3127 36.4804), (-81.2655 36.43...
815,821d814
< New names:
< * AREA -> AREA...1
< * PERIMETER -> PERIMETER...2
< * CNTY_ -> CNTY_...3
< * AREA -> AREA...16
< * PERIMETER -> PERIMETER...17
< * ...
858,860d850
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
Running 'sfg.R' [1s]
Comparing 'sfg.Rout' to 'sfg.Rout.save' ... OK
Running 'spatstat.R' [6s]
Comparing 'spatstat.Rout' to 'spatstat.Rout.save' ...77c77
< bbox: xmin: 123829.8 ymin: 14740.06 xmax: 930518.6 ymax: 318255.5
---
> bbox: xmin: 123829 ymin: 14744.69 xmax: 930521.8 ymax: 318259.9
81,90c81,90
< 1 window MULTIPOLYGON (((886135.8 31...
< 2 point POINT (339121.1 257811.6)
< 3 point POINT (827440.4 246568.3)
< 4 point POINT (451339.2 207943.6)
< 5 point POINT (268749.7 203323.4)
< 6 point POINT (516676.5 198556.1)
< 7 point POINT (692366 238643.1)
< 8 point POINT (843278.5 287241.6)
< 9 point POINT (648477.7 235466.6)
< 10 point POINT (852593 267248.3)
---
> 1 window MULTIPOLYGON (((886136 3141...
> 2 point POINT (339121.3 257815.9)
> 3 point POINT (827443.1 246572.7)
> 4 point POINT (451340 207948)
> 5 point POINT (268749.6 203327.8)
> 6 point POINT (516677.7 198560.6)
> 7 point POINT (692368 238647.5)
> 8 point POINT (843281.2 287246)
> 9 point POINT (648479.4 235471)
> 10 point POINT (852595.8 267252.6)
198c198
< Reading layer `nc.gpkg' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\gpkg\nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running 'stars.R' [4s]
Comparing 'stars.Rout' to 'stars.Rout.save' ...125c125
< Reading layer `nc.gpkg' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\gpkg\nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running 'testthat.R' [15s]
Running 'units.R' [2s]
Comparing 'units.Rout' to 'units.Rout.save' ... OK
Running 'wkb.R' [1s]
Comparing 'wkb.Rout' to 'wkb.Rout.save' ... OK
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> suppressPackageStartupMessages(library(sf))
>
> test_check("sf")
Cannot open layer foo
Reading layer `nospatial' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\gpkg\nospatial.gpkg' using driver `GPKG'
Reading layer `nospatial' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\gpkg\nospatial.gpkg' using driver `GPKG'
OGR: Unsupported geometry type
-- 1. Failure: filter to sfc works (@test_tidy.R#17) --------------------------
d %>% filter(!st_is_empty(geometry)) not identical to d[1, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
-- 2. Failure: filter to sfc works (@test_tidy.R#19) --------------------------
d %>% filter(st_is(geometry, "POINT")) not identical to d[1:2, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
Failed to create feature 1 in x
Failed to create feature 1 in x
== testthat results ===========================================================
[ OK: 696 | SKIPPED: 60 | WARNINGS: 7 | FAILED: 2 ]
1. Failure: filter to sfc works (@test_tidy.R#17)
2. Failure: filter to sfc works (@test_tidy.R#19)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-windows-ix86+x86_64
Version: 0.9-3
Check: running tests for arch ‘x64’
Result: ERROR
Running 'aggregate.R' [1s]
Comparing 'aggregate.Rout' to 'aggregate.Rout.save' ...4c4
< Linking to GEOS 3.8.0, GDAL 3.0.4, PROJ 6.3.1
---
> Linking to GEOS 3.8.0, GDAL 3.0.2, PROJ 6.2.1
Running 'cast.R' [1s]
Comparing 'cast.Rout' to 'cast.Rout.save' ... OK
Running 'crs.R' [2s]
Comparing 'crs.Rout' to 'crs.Rout.save' ...70,72d69
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running 'dist.R' [2s]
Comparing 'dist.Rout' to 'dist.Rout.save' ... OK
Running 'dplyr.R' [7s]
Comparing 'dplyr.Rout' to 'dplyr.Rout.save' ...69d68
< `summarise()` ungrouping output (override with `.groups` argument)
73c72
< bbox: xmin: -9386879 ymin: 4012985 xmax: -8399792 ymax: 4382074
---
> bbox: xmin: -9386880 ymin: 4012991 xmax: -8399788 ymax: 4382079
78,81c77,80
< 1 (0,0.1] 0.0760 (((-8678518 4054258, -8679090 4061398, -8680138 40615~
< 2 (0.1,0.12] 0.112 (((-9383226 4192545, -9375979 4199504, -9370834 41966~
< 3 (0.12,0.1~ 0.134 (((-8520834 4108024, -8522044 4111111, -8520108 41115~
< 4 (0.15,0.2~ 0.190 (((-8685776 4073050, -8684148 4070872, -8683671 40671~
---
> 1 (0,0.1] 0.0760 (((-8678517 4054264, -8679088 4061405, -8680136 40615â<c2><80>¦
> 2 (0.1,0.12] 0.112 (((-9383227 4192541, -9375980 4199500, -9370835 41966â<c2><80>¦
> 3 (0.12,0.1â<c2><80>¦ 0.134 (((-8520830 4108031, -8522040 4111119, -8520104 41115â<c2><80>¦
> 4 (0.15,0.2â<c2><80>¦ 0.190 (((-8685774 4073056, -8684147 4070879, -8683670 40671â<c2><80>¦
83d81
< `summarise()` ungrouping output (override with `.groups` argument)
106c104
< bbox: xmin: -8802506 ymin: 4012985 xmax: -8492272 ymax: 4166159
---
> bbox: xmin: -8802506 ymin: 4012991 xmax: -8492268 ymax: 4166167
111,116c109,114
< 1 95 (((-8588149 4131915, -8589852 4133296, -8589358 4135190, -8~ SID79 4
< 2 96 (((-8712000 4081952, -8719512 4077857, -8731642 4078857, -8~ SID79 5
< 3 97 (((-8685776 4073050, -8697388 4077816, -8700121 4077563, -8~ SID79 3
< 4 98 (((-8755886 4021930, -8802506 4069789, -8798771 4071773, -8~ SID79 17
< 5 99 (((-8678518 4054258, -8679090 4061398, -8680138 4061543, -8~ SID79 9
< 6 100 (((-8755886 4021930, -8753548 4025863, -8753053 4030189, -8~ SID79 6
---
> 1 95 (((-8588146 4131923, -8589850 4133303, -8589356 4135198, -8â<c2><80>¦ SID79 4
> 2 96 (((-8711999 4081959, -8719511 4077863, -8731642 4078864, -8â<c2><80>¦ SID79 5
> 3 97 (((-8685774 4073056, -8697387 4077823, -8700120 4077570, -8â<c2><80>¦ SID79 3
> 4 98 (((-8755885 4021935, -8802506 4069795, -8798771 4071779, -8â<c2><80>¦ SID79 17
> 5 99 (((-8678517 4054264, -8679088 4061405, -8680136 4061550, -8â<c2><80>¦ SID79 9
> 6 100 (((-8755885 4021935, -8753548 4025868, -8753052 4030195, -8â<c2><80>¦ SID79 6
121c119
< bbox: xmin: -9099356 ymin: 4310656 xmax: -8434990 ymax: 4382074
---
> bbox: xmin: -9099356 ymin: 4310668 xmax: -8434988 ymax: 4382079
126,131c124,129
< 1 1 (((-9069486 4332928, -9077065 4338195, -9079419 4338345, -9~ 1 0
< 2 2 (((-9043563 4351024, -9043652 4352966, -9046118 4356510, -9~ 0 3
< 3 3 (((-8956336 4334060, -8958567 4335740, -8965302 4336017, -8~ 5 6
< 4 4 (((-8461242 4344697, -8462174 4347203, -8463903 4346960, -8~ 1 2
< 5 5 (((-8595797 4333842, -8597684 4330201, -8604809 4329777, -8~ 9 3
< 6 6 (((-8543186 4332866, -8569416 4332359, -8570982 4333096, -8~ 7 5
---
> 1 1 (((-9069486 4332934, -9077066 4338201, -9079419 4338351, -9â<c2><80>¦ 1 0
> 2 2 (((-9043562 4351030, -9043652 4352973, -9046117 4356516, -9â<c2><80>¦ 0 3
> 3 3 (((-8956335 4334068, -8958566 4335747, -8965300 4336025, -8â<c2><80>¦ 5 6
> 4 4 (((-8461241 4344709, -8462173 4347214, -8463902 4346972, -8â<c2><80>¦ 1 2
> 5 5 (((-8595797 4333852, -8597683 4330212, -8604808 4329788, -8â<c2><80>¦ 9 3
> 6 6 (((-8543185 4332878, -8569416 4332369, -8570981 4333107, -8â<c2><80>¦ 7 5
136c134
< bbox: xmin: -9099356 ymin: 4310656 xmax: -8434990 ymax: 4382074
---
> bbox: xmin: -9099356 ymin: 4310668 xmax: -8434988 ymax: 4382079
141,146c139,144
< 1 (((-9069486 4332928, -9077065 4338195, -9079419 4338345, -9~ 1 1 0
< 2 (((-9043563 4351024, -9043652 4352966, -9046118 4356510, -9~ 2 0 3
< 3 (((-8956336 4334060, -8958567 4335740, -8965302 4336017, -8~ 3 5 6
< 4 (((-8461242 4344697, -8462174 4347203, -8463903 4346960, -8~ 4 1 2
< 5 (((-8595797 4333842, -8597684 4330201, -8604809 4329777, -8~ 5 9 3
< 6 (((-8543186 4332866, -8569416 4332359, -8570982 4333096, -8~ 6 7 5
---
> 1 (((-9069486 4332934, -9077066 4338201, -9079419 4338351, -9â<c2><80>¦ 1 1 0
> 2 (((-9043562 4351030, -9043652 4352973, -9046117 4356516, -9â<c2><80>¦ 2 0 3
> 3 (((-8956335 4334068, -8958566 4335747, -8965300 4336025, -8â<c2><80>¦ 3 5 6
> 4 (((-8461241 4344709, -8462173 4347214, -8463902 4346972, -8â<c2><80>¦ 4 1 2
> 5 (((-8595797 4333852, -8597683 4330212, -8604808 4329788, -8â<c2><80>¦ 5 9 3
> 6 (((-8543185 4332878, -8569416 4332369, -8570981 4333107, -8â<c2><80>¦ 6 7 5
174d171
< `summarise()` ungrouping output (override with `.groups` argument)
181c178
< bbox: xmin: 123829.8 ymin: 14740.06 xmax: 930518.6 ymax: 318255.5
---
> bbox: xmin: 123829 ymin: 14744.69 xmax: 930521.8 ymax: 318259.9
186c183
< 1 2.593264e-06 (((705428.2 49242.97, 705860.3 27430.49, 698896.5 18674.82, 6485~
---
> 1 2.593234e-06 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88, 6485â<c2><80>¦
191c188
< bbox: xmin: 123829.8 ymin: 14740.06 xmax: 930518.6 ymax: 318255.5
---
> bbox: xmin: 123829 ymin: 14744.69 xmax: 930521.8 ymax: 318259.9
196c193
< 1 2.589402e-06 (((724643.2 62311.01, 714304.8 49727.85, 711690.8 35991.28, ~
---
> 1 2.589362e-06 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, 70â<c2><80>¦
203c200
< bbox: xmin: 123829.8 ymin: 14740.06 xmax: 930518.6 ymax: 318255.5
---
> bbox: xmin: 123829 ymin: 14744.69 xmax: 930521.8 ymax: 318259.9
208c205
< 1 329962 (((705428.2 49242.97, 705860.3 27430.49, 698896.5 18674.82~
---
> 1 329962 (((705429.2 49248.34, 705861.5 27435.66, 698897.7 18679.88â<c2><80>¦
213c210
< bbox: xmin: 123829.8 ymin: 14740.06 xmax: 930518.6 ymax: 318255.5
---
> bbox: xmin: 123829 ymin: 14744.69 xmax: 930521.8 ymax: 318259.9
216c213
< `sum(A * new_dens~ geometry
---
> `sum(A * new_densâ<c2><80>¦ geometry
218c215
< 1 329962 (((724643.2 62311.01, 714304.8 49727.85, 711690.8 35991.28~
---
> 1 329962 (((724644.4 62316.58, 714305.9 49733.25, 711692 35996.55, â<c2><80>¦
268,272d264
< Warning message:
< The `keep` argument of `group_split()` is deprecated as of dplyr 1.0.0.
< Please use the `.keep` argument instead.
< This warning is displayed once every 8 hours.
< Call `lifecycle::last_warnings()` to see where this warning was generated.
Running 'empty.R' [1s]
Comparing 'empty.Rout' to 'empty.Rout.save' ... OK
Running 'gdal_geom.R' [2s]
Comparing 'gdal_geom.Rout' to 'gdal_geom.Rout.save' ...245,249c245,249
< [1,] 1760230516 0.114
< [2,] 946417787 0.061
< [3,] 2202223078 0.143
< [4,] 1074332698 0.070
< [5,] 2352528086 0.153
---
> [1,] 1760244967 0.114
> [2,] 946435667 0.061
> [3,] 2202248253 0.143
> [4,] 1074351919 0.070
> [5,] 2352539533 0.153
278c278
< Error : cannot convert km into °
---
> Error : cannot convert km into °
284a285,287
> Warning message:
> In st_buffer.sfc(sfc, units::set_units(0.1, rad)) :
> st_buffer does not correctly buffer longitude/latitude data
Running 'geos.R' [13s]
Comparing 'geos.Rout' to 'geos.Rout.save' ...13,22c13,22
< [1,] 0.00 0.00 25651.99 440561.48 299772.34 361529.73 419671.66
< [2,] 0.00 0.00 0.00 409429.44 268945.05 332590.52 388545.58
< [3,] 25651.99 0.00 0.00 367556.52 227018.38 290298.04 346669.14
< [4,] 440561.48 409429.44 367556.52 0.00 67226.86 45537.62 0.00
< [5,] 299772.34 268945.05 227018.38 67226.86 0.00 0.00 46527.56
< [6,] 361529.73 332590.52 290298.04 45537.62 0.00 0.00 30213.17
< [7,] 419671.66 388545.58 346669.14 0.00 46527.56 30213.17 0.00
< [8,] 384593.29 354295.06 312351.76 16130.19 11926.86 0.00 0.00
< [9,] 262353.97 231217.73 189310.73 140455.97 0.00 64606.27 119564.00
< [10,] 71138.53 41943.71 0.00 330752.58 190183.42 252373.26 309863.33
---
> [1,] 0.00 0.00 25652.53 440561.15 299772.18 361529.53 419671.2
> [2,] 0.00 0.00 0.00 409428.54 268944.31 332589.77 388544.5
> [3,] 25652.53 0.00 0.00 367555.48 227017.51 290297.10 346667.9
> [4,] 440561.15 409428.54 367555.48 0.00 67226.86 45537.55 0.0
> [5,] 299772.18 268944.31 227017.51 67226.86 0.00 0.00 46527.4
> [6,] 361529.53 332589.77 290297.10 45537.55 0.00 0.00 30213.0
> [7,] 419671.16 388544.52 346667.93 0.00 46527.40 30213.00 0.0
> [8,] 384592.90 354294.11 312350.68 16130.34 11926.81 0.00 0.0
> [9,] 262354.29 231217.49 189310.35 140455.87 0.00 64606.24 119563.7
> [10,] 71139.29 41943.83 0.00 330751.39 190182.39 252372.06 309862.0
24,33c24,33
< [1,] 384593.29 262353.97 71138.53
< [2,] 354295.06 231217.73 41943.71
< [3,] 312351.76 189310.73 0.00
< [4,] 16130.19 140455.97 330752.58
< [5,] 11926.86 0.00 190183.42
< [6,] 0.00 64606.27 252373.26
< [7,] 0.00 119564.00 309863.33
< [8,] 0.00 85533.33 275391.07
< [9,] 85533.33 0.00 152489.45
< [10,] 275391.07 152489.45 0.00
---
> [1,] 384592.90 262354.29 71139.29
> [2,] 354294.11 231217.49 41943.83
> [3,] 312350.68 189310.35 0.00
> [4,] 16130.34 140455.87 330751.39
> [5,] 11926.81 0.00 190182.39
> [6,] 0.00 64606.24 252372.06
> [7,] 0.00 119563.73 309861.97
> [8,] 0.00 85533.12 275389.78
> [9,] 85533.12 0.00 152488.92
> [10,] 275389.78 152488.92 0.00
Running 'graticule.R' [4s]
Comparing 'graticule.Rout' to 'graticule.Rout.save' ... OK
Running 'grid.R' [2s]
Comparing 'grid.Rout' to 'grid.Rout.save' ... OK
Running 'maps.R' [3s]
Comparing 'maps.Rout' to 'maps.Rout.save' ... OK
Running 'plot.R' [9s]
Comparing 'plot.Rout' to 'plot.Rout.save' ...25,27d24
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running 'read.R' [3s]
Comparing 'read.Rout' to 'read.Rout.save' ...286c286
< 2 POINT (367470.5 4962415)
---
> 2 POINT (367470.5 4962414)
330c330
< Reading layer `tst__' from data source `d:\RCompile\CRANpkg\local\4.0\sf.Rcheck\tests_x64\tst__.gpkg' using driver `GPKG'
---
> Reading layer `tst__' from data source `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
351a352,358
> > proc.time()
> user system elapsed
> <<<<<<< HEAD
> 1.502 0.090 1.590
> =======
> 1.166 0.068 1.230
> >>>>>>> gdal3
Running 'roundtrip.R' [12s]
Comparing 'roundtrip.Rout' to 'roundtrip.Rout.save' ...48,50d47
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
52,54d48
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
57,60c51,52
< Warning messages:
< 1: In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
< 2: In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
---
> Warning message:
> In spTransform(meuse.grid, CRS("+proj=longlat +ellps=WGS84 +no_defs")) :
63,65d54
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
67,69d55
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
71,73d56
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
114a98,100
> Warning message:
> In CPL_crs_from_input(x) :
> GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order.
162c148
< Reading layer `nc.gpkg' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\gpkg\nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running 'sample.R' [1s]
Comparing 'sample.Rout' to 'sample.Rout.save' ... OK
Running 'sfc.R' [12s]
Comparing 'sfc.Rout' to 'sfc.Rout.save' ...335c335
< "3.8.0" "3.0.4" "6.3.1"
---
> "3.8.0" "3.0.4" "7.0.0"
568,570c568,570
< 1 1 5 b POINT (0 0)
< 2 2 6 c POINT (1 1)
< 3 NA 2 a POINT EMPTY
---
> 1 NA 2 a POINT EMPTY
> 2 1 5 b POINT (0 0)
> 3 2 6 c POINT (1 1)
641c641
< Reading layer `nc' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\shape\nc.shp' using driver `ESRI Shapefile'
---
> Reading layer `nc' from data source `/home/edzer/git/sf.Rcheck/sf/shape/nc.shp' using driver `ESRI Shapefile'
657c657
< bbox: xmin: 406265 ymin: 48359.7 xmax: 3052877 ymax: 1044143
---
> bbox: xmin: 406262.2 ymin: 48374.87 xmax: 3052887 ymax: 1044158
672,681c672,681
< 1 10 1364 0 19 A 4 #fb80724d MULTIPOLYGON (((1270813 913...
< 2 10 542 3 12 A 4 #fb80724d MULTIPOLYGON (((1340553 959...
< 3 208 3616 6 260 A 5 #80b1d34d MULTIPOLYGON (((1570586 910...
< 4 123 830 2 145 A 10 #bc80bd4d MULTIPOLYGON (((2881206 948...
< 5 1066 1606 3 1197 A 8 #fccde54d MULTIPOLYGON (((2525700 911...
< 6 954 1838 5 1237 A 9 #d9d9d94d MULTIPOLYGON (((2665112 911...
< 7 115 350 2 139 A 10 #bc80bd4d MULTIPOLYGON (((2881206 948...
< 8 254 594 2 371 A 9 #d9d9d94d MULTIPOLYGON (((2717988 951...
< 9 748 1190 2 844 A 8 #fccde54d MULTIPOLYGON (((2203888 914...
< 10 160 2038 5 176 A 5 #80b1d34d MULTIPOLYGON (((1697618 911...
---
> 1 10 1364 0 19 A 4 #fb80724d MULTIPOLYGON (((1270814 913...
> 2 10 542 3 12 A 4 #fb80724d MULTIPOLYGON (((1340555 959...
> 3 208 3616 6 260 A 5 #80b1d34d MULTIPOLYGON (((1570591 910...
> 4 123 830 2 145 A 10 #bc80bd4d MULTIPOLYGON (((2881208 948...
> 5 1066 1606 3 1197 A 8 #fccde54d MULTIPOLYGON (((2525701 911...
> 6 954 1838 5 1237 A 9 #d9d9d94d MULTIPOLYGON (((2665113 911...
> 7 115 350 2 139 A 10 #bc80bd4d MULTIPOLYGON (((2881208 948...
> 8 254 594 2 371 A 9 #d9d9d94d MULTIPOLYGON (((2717989 951...
> 9 748 1190 2 844 A 8 #fccde54d MULTIPOLYGON (((2203890 914...
> 10 160 2038 5 176 A 5 #80b1d34d MULTIPOLYGON (((1697624 911...
774c774
< bbox: xmin: 1200740 ymin: 942534 xmax: 1425790 ymax: 1036850
---
> bbox: xmin: 1200740 ymin: 942550 xmax: 1425790 ymax: 1036860
777,781c777,781
< POINT (1228809 1011240)
< POINT (1233859 956706)
< POINT (1260039 1007646)
< POINT (1271553 1021490)
< POINT (1222551 980299)
---
> POINT (1228809 1011255)
> POINT (1233859 956721)
> POINT (1260039 1007661)
> POINT (1271553 1021505)
> POINT (1222552 980314)
789c789
< bbox: xmin: -81.7408 ymin: 36.2735 xmax: -80.9188 ymax: 36.582
---
> bbox: xmin: -81.7408 ymin: 36.2735 xmax: -80.9188 ymax: 36.5821
792c792
< MULTIPOINT ((-81.3127 36.4803), (-81.2655 36.43...
---
> MULTIPOINT ((-81.3127 36.4804), (-81.2655 36.43...
815,821d814
< New names:
< * AREA -> AREA...1
< * PERIMETER -> PERIMETER...2
< * CNTY_ -> CNTY_...3
< * AREA -> AREA...16
< * PERIMETER -> PERIMETER...17
< * ...
858,860d850
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
< Discarded datum Amersfoort in CRS definition
Running 'sfg.R' [1s]
Comparing 'sfg.Rout' to 'sfg.Rout.save' ... OK
Running 'spatstat.R' [6s]
Comparing 'spatstat.Rout' to 'spatstat.Rout.save' ...77c77
< bbox: xmin: 123829.8 ymin: 14740.06 xmax: 930518.6 ymax: 318255.5
---
> bbox: xmin: 123829 ymin: 14744.69 xmax: 930521.8 ymax: 318259.9
81,90c81,90
< 1 window MULTIPOLYGON (((886135.8 31...
< 2 point POINT (339121.1 257811.6)
< 3 point POINT (827440.4 246568.3)
< 4 point POINT (451339.2 207943.6)
< 5 point POINT (268749.7 203323.4)
< 6 point POINT (516676.5 198556.1)
< 7 point POINT (692366 238643.1)
< 8 point POINT (843278.5 287241.6)
< 9 point POINT (648477.7 235466.6)
< 10 point POINT (852593 267248.3)
---
> 1 window MULTIPOLYGON (((886136 3141...
> 2 point POINT (339121.3 257815.9)
> 3 point POINT (827443.1 246572.7)
> 4 point POINT (451340 207948)
> 5 point POINT (268749.6 203327.8)
> 6 point POINT (516677.7 198560.6)
> 7 point POINT (692368 238647.5)
> 8 point POINT (843281.2 287246)
> 9 point POINT (648479.4 235471)
> 10 point POINT (852595.8 267252.6)
198c198
< Reading layer `nc.gpkg' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\gpkg\nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running 'stars.R' [3s]
Comparing 'stars.Rout' to 'stars.Rout.save' ...125c125
< Reading layer `nc.gpkg' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\gpkg\nc.gpkg' using driver `GPKG'
---
> Reading layer `nc.gpkg' from data source `/home/edzer/git/sf.Rcheck/sf/gpkg/nc.gpkg' using driver `GPKG'
Running 'testthat.R' [12s]
Running 'units.R' [2s]
Comparing 'units.Rout' to 'units.Rout.save' ... OK
Running 'wkb.R' [1s]
Comparing 'wkb.Rout' to 'wkb.Rout.save' ... OK
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> suppressPackageStartupMessages(library(sf))
>
> test_check("sf")
Cannot open layer foo
Reading layer `nospatial' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\gpkg\nospatial.gpkg' using driver `GPKG'
Reading layer `nospatial' from data source `D:\temp\Rtmp4GfcoB\RLIBS_1337c1b437fb0\sf\gpkg\nospatial.gpkg' using driver `GPKG'
OGR: Unsupported geometry type
-- 1. Failure: filter to sfc works (@test_tidy.R#17) --------------------------
d %>% filter(!st_is_empty(geometry)) not identical to d[1, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
-- 2. Failure: filter to sfc works (@test_tidy.R#19) --------------------------
d %>% filter(st_is(geometry, "POINT")) not identical to d[1:2, ].
Component "geometry": Attributes: < Component "class": 1 string mismatch >
Failed to create feature 1 in x
Failed to create feature 1 in x
== testthat results ===========================================================
[ OK: 696 | SKIPPED: 60 | WARNINGS: 7 | FAILED: 2 ]
1. Failure: filter to sfc works (@test_tidy.R#17)
2. Failure: filter to sfc works (@test_tidy.R#19)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-windows-ix86+x86_64